Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIML2Q8N7C3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIML2Q8N7C3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIML2Q8N7C3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRIML2Q8N7C3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIML2Q8N7C3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIML2Q8N7C3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
TRIML2Q8N7C3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRIML2Q8N7C3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIML2Q8N7C3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIML2Q8N7C3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIML2Q8N7C3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIML2Q8N7C3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIML2Q8N7C3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIML2Q8N7C3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 AL451085.2-201ENST00000605085 799 ntBASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 AL117332.1-201ENST00000622628 974 ntBASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIML2Q8N7C3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIML2Q8N7C3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 AC241377.3-202ENST00000626088 1088 ntBASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 AC241585.3-202ENST00000628937 1088 ntBASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 AC245100.8-202ENST00000629247 1058 ntBASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIML2Q8N7C3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 AL499627.2-201ENST00000606283 725 ntBASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 CA15P2-201ENST00000611168 834 ntBASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIML2Q8N7C3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIML2Q8N7C3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIML2Q8N7C3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms