Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC33.85■■■■□ 3.01
VPS8Q8N3P4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
VPS8Q8N3P4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
VPS8Q8N3P4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC33.85■■■■□ 3.01
VPS8Q8N3P4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC33.85■■■■□ 3.01
VPS8Q8N3P4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC33.85■■■■□ 3.01
VPS8Q8N3P4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
VPS8Q8N3P4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC33.85■■■■□ 3.01
VPS8Q8N3P4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC33.85■■■■□ 3.01
VPS8Q8N3P4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC33.85■■■■□ 3.01
VPS8Q8N3P4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC33.84■■■■□ 3.01
VPS8Q8N3P4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
VPS8Q8N3P4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC33.83■■■■□ 3.01
VPS8Q8N3P4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
VPS8Q8N3P4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC33.83■■■■□ 3.01
VPS8Q8N3P4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
VPS8Q8N3P4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC33.83■■■■□ 3.01
VPS8Q8N3P4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC33.82■■■■□ 3
VPS8Q8N3P4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC33.82■■■■□ 3
VPS8Q8N3P4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC33.82■■■■□ 3
VPS8Q8N3P4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC33.82■■■■□ 3
VPS8Q8N3P4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
VPS8Q8N3P4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC33.81■■■■□ 3
VPS8Q8N3P4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC33.81■■■■□ 3
VPS8Q8N3P4 AC006015.1-201ENST00000429970 570 ntBASIC33.81■■■■□ 3
VPS8Q8N3P4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
VPS8Q8N3P4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
VPS8Q8N3P4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC33.81■■■■□ 3
VPS8Q8N3P4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC33.81■■■■□ 3
VPS8Q8N3P4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC33.81■■■■□ 3
VPS8Q8N3P4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC33.81■■■■□ 3
VPS8Q8N3P4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC33.81■■■■□ 3
VPS8Q8N3P4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC33.8■■■■□ 3
VPS8Q8N3P4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC33.8■■■■□ 3
VPS8Q8N3P4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC33.79■■■■□ 3
VPS8Q8N3P4 DBI-210ENST00000542275 757 ntTSL 5 BASIC33.79■■■■□ 3
VPS8Q8N3P4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC33.79■■■■□ 3
VPS8Q8N3P4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
VPS8Q8N3P4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
VPS8Q8N3P4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC33.79■■■■□ 3
VPS8Q8N3P4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC33.79■■■■□ 3
VPS8Q8N3P4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC33.79■■■■□ 3
VPS8Q8N3P4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC33.79■■■■□ 3
VPS8Q8N3P4 EEF1DP3-203ENST00000566025 782 ntBASIC33.79■■■■□ 3
VPS8Q8N3P4 AC104187.1-201ENST00000607510 612 ntBASIC33.79■■■■□ 3
VPS8Q8N3P4 GUSBP5-202ENST00000510805 1989 ntBASIC33.78■■■■□ 3
VPS8Q8N3P4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
VPS8Q8N3P4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC33.78■■■■□ 3
VPS8Q8N3P4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC33.78■■■■□ 3
VPS8Q8N3P4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC33.78■■■■□ 3
VPS8Q8N3P4 AC242852.2-201ENST00000615738 1807 ntBASIC33.78■■■■□ 3
VPS8Q8N3P4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC33.78■■■■□ 3
VPS8Q8N3P4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC33.78■■■■□ 3
VPS8Q8N3P4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC33.77■■■■□ 3
VPS8Q8N3P4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC33.77■■■■□ 3
VPS8Q8N3P4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC33.77■■■■□ 3
VPS8Q8N3P4 AC092053.2-201ENST00000640557 1818 ntBASIC33.77■■■■□ 3
VPS8Q8N3P4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
VPS8Q8N3P4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
VPS8Q8N3P4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC33.77■■■■□ 3
VPS8Q8N3P4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC33.77■■■■□ 3
VPS8Q8N3P4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC33.77■■■■□ 3
VPS8Q8N3P4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC33.77■■■■□ 3
VPS8Q8N3P4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC33.77■■■■□ 3
VPS8Q8N3P4 AC233723.2-201ENST00000623798 2106 ntBASIC33.77■■■■□ 3
VPS8Q8N3P4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC33.76■■■■□ 3
VPS8Q8N3P4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC33.76■■■■□ 3
VPS8Q8N3P4 FXN-202ENST00000396364 980 ntTSL 5 BASIC33.76■■■□□ 2.99
VPS8Q8N3P4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC33.76■■■□□ 2.99
VPS8Q8N3P4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
VPS8Q8N3P4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC33.75■■■□□ 2.99
VPS8Q8N3P4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC33.75■■■□□ 2.99
VPS8Q8N3P4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC33.75■■■□□ 2.99
VPS8Q8N3P4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC33.75■■■□□ 2.99
VPS8Q8N3P4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC33.74■■■□□ 2.99
VPS8Q8N3P4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC33.74■■■□□ 2.99
VPS8Q8N3P4 KRT19P1-201ENST00000405746 1186 ntBASIC33.74■■■□□ 2.99
VPS8Q8N3P4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC33.74■■■□□ 2.99
VPS8Q8N3P4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
VPS8Q8N3P4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
VPS8Q8N3P4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC33.74■■■□□ 2.99
VPS8Q8N3P4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 FAM99A-202ENST00000538190 1989 ntBASIC33.73■■■□□ 2.99
VPS8Q8N3P4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC33.73■■■□□ 2.99
VPS8Q8N3P4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC33.73■■■□□ 2.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms