Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
DHX40Q8IX18 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.89■■□□□ 1.41
DHX40Q8IX18 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
DHX40Q8IX18 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
DHX40Q8IX18 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.88■■□□□ 1.41
DHX40Q8IX18 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DHX40Q8IX18 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
DHX40Q8IX18 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.88■■□□□ 1.41
DHX40Q8IX18 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DHX40Q8IX18 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.88■■□□□ 1.41
DHX40Q8IX18 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
DHX40Q8IX18 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.88■■□□□ 1.41
DHX40Q8IX18 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.88■■□□□ 1.41
DHX40Q8IX18 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
DHX40Q8IX18 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DHX40Q8IX18 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.88■■□□□ 1.41
DHX40Q8IX18 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
DHX40Q8IX18 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
DHX40Q8IX18 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
DHX40Q8IX18 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
DHX40Q8IX18 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
DHX40Q8IX18 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.87■■□□□ 1.41
DHX40Q8IX18 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
DHX40Q8IX18 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.87■■□□□ 1.41
DHX40Q8IX18 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
DHX40Q8IX18 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
DHX40Q8IX18 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
DHX40Q8IX18 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.86■■□□□ 1.41
DHX40Q8IX18 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
DHX40Q8IX18 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.86■■□□□ 1.41
DHX40Q8IX18 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
DHX40Q8IX18 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
DHX40Q8IX18 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.86■■□□□ 1.41
DHX40Q8IX18 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
DHX40Q8IX18 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
DHX40Q8IX18 TSPY9P-201ENST00000440215 945 ntBASIC23.86■■□□□ 1.41
DHX40Q8IX18 TSPY11P-201ENST00000442607 1045 ntBASIC23.86■■□□□ 1.41
DHX40Q8IX18 UNC93B8-201ENST00000511903 705 ntBASIC23.86■■□□□ 1.41
DHX40Q8IX18 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
DHX40Q8IX18 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
DHX40Q8IX18 AC010997.5-201ENST00000609182 354 ntBASIC23.86■■□□□ 1.41
DHX40Q8IX18 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.86■■□□□ 1.41
DHX40Q8IX18 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
DHX40Q8IX18 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
DHX40Q8IX18 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
DHX40Q8IX18 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
DHX40Q8IX18 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
DHX40Q8IX18 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
DHX40Q8IX18 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
DHX40Q8IX18 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DHX40Q8IX18 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.85■■□□□ 1.41
DHX40Q8IX18 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.85■■□□□ 1.41
DHX40Q8IX18 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
DHX40Q8IX18 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.85■■□□□ 1.41
DHX40Q8IX18 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
DHX40Q8IX18 LINC01521-201ENST00000504184 1943 ntBASIC23.85■■□□□ 1.41
DHX40Q8IX18 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.85■■□□□ 1.41
DHX40Q8IX18 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.85■■□□□ 1.41
DHX40Q8IX18 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
DHX40Q8IX18 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.85■■□□□ 1.41
DHX40Q8IX18 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
DHX40Q8IX18 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
DHX40Q8IX18 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
DHX40Q8IX18 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
DHX40Q8IX18 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DHX40Q8IX18 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
DHX40Q8IX18 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DHX40Q8IX18 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DHX40Q8IX18 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.84■■□□□ 1.41
DHX40Q8IX18 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DHX40Q8IX18 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.84■■□□□ 1.41
DHX40Q8IX18 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.84■■□□□ 1.41
DHX40Q8IX18 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.84■■□□□ 1.41
DHX40Q8IX18 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DHX40Q8IX18 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
DHX40Q8IX18 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DHX40Q8IX18 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
DHX40Q8IX18 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.83■■□□□ 1.41
DHX40Q8IX18 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DHX40Q8IX18 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
DHX40Q8IX18 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
DHX40Q8IX18 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DHX40Q8IX18 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.83■■□□□ 1.41
DHX40Q8IX18 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
DHX40Q8IX18 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.83■■□□□ 1.41
DHX40Q8IX18 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DHX40Q8IX18 AC133637.1-201ENST00000624115 1537 ntBASIC23.83■■□□□ 1.41
DHX40Q8IX18 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
DHX40Q8IX18 OR7E47P-201ENST00000546390 1422 ntBASIC23.83■■□□□ 1.4
DHX40Q8IX18 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.83■■□□□ 1.4
DHX40Q8IX18 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.82■■□□□ 1.4
DHX40Q8IX18 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DHX40Q8IX18 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.82■■□□□ 1.4
DHX40Q8IX18 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
DHX40Q8IX18 KRT16P3-201ENST00000439127 1283 ntBASIC23.82■■□□□ 1.4
DHX40Q8IX18 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.82■■□□□ 1.4
DHX40Q8IX18 AC104564.3-201ENST00000582367 638 ntBASIC23.82■■□□□ 1.4
DHX40Q8IX18 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DHX40Q8IX18 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.82■■□□□ 1.4
DHX40Q8IX18 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms