Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LDB1Q86U70 AC133561.4-201ENST00000566112 224 ntBASIC21.43■■□□□ 1.02
LDB1Q86U70 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LDB1Q86U70 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LDB1Q86U70 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LDB1Q86U70 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LDB1Q86U70 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
LDB1Q86U70 EDA-201ENST00000338901 1233 ntBASIC21.42■■□□□ 1.02
LDB1Q86U70 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LDB1Q86U70 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LDB1Q86U70 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LDB1Q86U70 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
LDB1Q86U70 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.42■■□□□ 1.02
LDB1Q86U70 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.42■■□□□ 1.02
LDB1Q86U70 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.42■■□□□ 1.02
LDB1Q86U70 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LDB1Q86U70 AL139246.5-201ENST00000606645 996 ntBASIC21.42■■□□□ 1.02
LDB1Q86U70 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LDB1Q86U70 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LDB1Q86U70 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.41■■□□□ 1.02
LDB1Q86U70 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LDB1Q86U70 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LDB1Q86U70 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LDB1Q86U70 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LDB1Q86U70 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
LDB1Q86U70 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.41■■□□□ 1.02
LDB1Q86U70 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
LDB1Q86U70 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LDB1Q86U70 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
LDB1Q86U70 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.41■■□□□ 1.02
LDB1Q86U70 AL355001.2-201ENST00000620617 1191 ntBASIC21.41■■□□□ 1.02
LDB1Q86U70 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LDB1Q86U70 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.41■■□□□ 1.02
LDB1Q86U70 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.41■■□□□ 1.02
LDB1Q86U70 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LDB1Q86U70 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.4■■□□□ 1.02
LDB1Q86U70 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
LDB1Q86U70 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.4■■□□□ 1.02
LDB1Q86U70 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LDB1Q86U70 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LDB1Q86U70 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.4■■□□□ 1.02
LDB1Q86U70 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LDB1Q86U70 TSPY26P-201ENST00000476365 1326 ntBASIC21.4■■□□□ 1.02
LDB1Q86U70 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.4■■□□□ 1.02
LDB1Q86U70 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LDB1Q86U70 MIR939-201ENST00000401314 82 ntBASIC21.4■■□□□ 1.02
LDB1Q86U70 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.4■■□□□ 1.02
LDB1Q86U70 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.4■■□□□ 1.02
LDB1Q86U70 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.4■■□□□ 1.02
LDB1Q86U70 IGHV3-19-201ENST00000521488 291 ntBASIC21.4■■□□□ 1.02
LDB1Q86U70 AC027682.1-201ENST00000562846 899 ntBASIC21.4■■□□□ 1.02
LDB1Q86U70 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.4■■□□□ 1.02
LDB1Q86U70 AL136967.2-201ENST00000623968 743 ntBASIC21.4■■□□□ 1.02
LDB1Q86U70 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LDB1Q86U70 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
LDB1Q86U70 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.4■■□□□ 1.02
LDB1Q86U70 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LDB1Q86U70 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LDB1Q86U70 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
LDB1Q86U70 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LDB1Q86U70 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LDB1Q86U70 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
LDB1Q86U70 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LDB1Q86U70 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LDB1Q86U70 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LDB1Q86U70 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.39■■□□□ 1.01
LDB1Q86U70 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LDB1Q86U70 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LDB1Q86U70 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
LDB1Q86U70 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
LDB1Q86U70 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.39■■□□□ 1.01
LDB1Q86U70 AP004607.7-201ENST00000527152 1677 ntBASIC21.39■■□□□ 1.01
LDB1Q86U70 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LDB1Q86U70 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LDB1Q86U70 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LDB1Q86U70 AL137060.1-201ENST00000618151 2648 ntBASIC21.39■■□□□ 1.01
LDB1Q86U70 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LDB1Q86U70 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LDB1Q86U70 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LDB1Q86U70 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
LDB1Q86U70 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LDB1Q86U70 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LDB1Q86U70 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
LDB1Q86U70 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
LDB1Q86U70 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.38■■□□□ 1.01
LDB1Q86U70 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.38■■□□□ 1.01
LDB1Q86U70 SMUG1P1-201ENST00000590640 811 ntBASIC21.38■■□□□ 1.01
LDB1Q86U70 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
LDB1Q86U70 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.38■■□□□ 1.01
LDB1Q86U70 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
LDB1Q86U70 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
LDB1Q86U70 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LDB1Q86U70 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LDB1Q86U70 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LDB1Q86U70 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LDB1Q86U70 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
LDB1Q86U70 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LDB1Q86U70 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
LDB1Q86U70 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.37■■□□□ 1.01
LDB1Q86U70 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms