Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRTCAP3Q53RY4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
KRTCAP3Q53RY4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRTCAP3Q53RY4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRTCAP3Q53RY4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRTCAP3Q53RY4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KRTCAP3Q53RY4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 CD99P1-205ENST00000527459 561 ntBASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 AC133552.2-202ENST00000575694 574 ntBASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 AC053503.5-201ENST00000601508 636 ntBASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 AC010536.3-201ENST00000620306 533 ntBASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.26■□□□□ 0.67
KRTCAP3Q53RY4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 AC093323.1-202ENST00000635031 2045 ntBASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 AF201337.1-201ENST00000520239 748 ntBASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.25■□□□□ 0.67
KRTCAP3Q53RY4 LINC00526-201ENST00000581067 1875 ntBASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 ABHD17AP1-201ENST00000358206 933 ntBASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 EEF1DP3-203ENST00000566025 782 ntBASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 AC013268.1-206ENST00000638368 961 ntBASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 AC112229.1-201ENST00000639295 961 ntBASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRTCAP3Q53RY4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 CNN2P6-201ENST00000439038 900 ntBASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 TMEM191A-211ENST00000637163 1067 ntBASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRTCAP3Q53RY4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.22■□□□□ 0.67
KRTCAP3Q53RY4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms