Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 SEC14YMR079W 915 nt4.53□□□□□ -1.68
SSL2Q00578 SIW14YNL032W 846 nt4.53□□□□□ -1.68
SSL2Q00578 YNL296WYNL296W 315 nt4.53□□□□□ -1.68
SSL2Q00578 YBR071WYBR071W 636 nt4.53□□□□□ -1.68
SSL2Q00578 RXT2YBR095C 1293 nt4.53□□□□□ -1.68
SSL2Q00578 CDC14YFR028C 1656 nt4.53□□□□□ -1.68
SSL2Q00578 DPH6YLR143W 2058 nt4.53□□□□□ -1.68
SSL2Q00578 DIP2YLR129W 2832 nt4.53□□□□□ -1.68
SSL2Q00578 MDM30YLR368W 1797 nt4.53□□□□□ -1.69
SSL2Q00578 BCS1YDR375C 1371 nt4.53□□□□□ -1.69
SSL2Q00578 SMF1YOL122C 1728 nt4.52□□□□□ -1.69
SSL2Q00578 RTK1YDL025C 1863 nt4.52□□□□□ -1.69
SSL2Q00578 NSE4YDL105W 1209 nt4.52□□□□□ -1.69
SSL2Q00578 YEL053W-AYEL053W-A 348 nt4.52□□□□□ -1.69
SSL2Q00578 BUD25YER014C-A 462 nt4.52□□□□□ -1.69
SSL2Q00578 YIL171W-AYIL171W-A 453 nt4.52□□□□□ -1.69
SSL2Q00578 YJL220WYJL220W 453 nt4.52□□□□□ -1.69
SSL2Q00578 RRG7YOR305W 729 nt4.52□□□□□ -1.69
SSL2Q00578 OXR1YPL196W 822 nt4.52□□□□□ -1.69
SSL2Q00578 YPR145C-AYPR145C-A 237 nt4.52□□□□□ -1.69
SSL2Q00578 RIB5YBR256C 717 nt4.52□□□□□ -1.69
SSL2Q00578 SPR3YGR059W 1539 nt4.51□□□□□ -1.69
SSL2Q00578 ECM16YMR128W 3804 nt4.51□□□□□ -1.69
SSL2Q00578 SWI1YPL016W 3945 nt4.51□□□□□ -1.69
SSL2Q00578 YCL076WYCL076W 744 nt4.51□□□□□ -1.69
SSL2Q00578 RPL13AYDL082W 600 nt4.51□□□□□ -1.69
SSL2Q00578 SHU2YDR078C 672 nt4.51□□□□□ -1.69
SSL2Q00578 GRX3YDR098C 858 nt4.51□□□□□ -1.69
SSL2Q00578 MTC7YEL033W 420 nt4.51□□□□□ -1.69
SSL2Q00578 TDA10YGR205W 873 nt4.51□□□□□ -1.69
SSL2Q00578 BET1YIL004C 429 nt4.51□□□□□ -1.69
SSL2Q00578 YPT52YKR014C 705 nt4.51□□□□□ -1.69
SSL2Q00578 YML047W-AYML047W-A 366 nt4.51□□□□□ -1.69
SSL2Q00578 MNL1YHR204W 2391 nt4.51□□□□□ -1.69
SSL2Q00578 TDA6YPR157W 1404 nt4.51□□□□□ -1.69
SSL2Q00578 YCR001WYCR001W 315 nt4.5□□□□□ -1.69
SSL2Q00578 YCR101CYCR101C 549 nt4.5□□□□□ -1.69
SSL2Q00578 YHR173CYHR173C 339 nt4.5□□□□□ -1.69
SSL2Q00578 BET4YJL031C 984 nt4.5□□□□□ -1.69
SSL2Q00578 CNB1YKL190W 528 nt4.5□□□□□ -1.69
SSL2Q00578 CMS1YLR003C 876 nt4.5□□□□□ -1.69
SSL2Q00578 RLP24YLR009W 600 nt4.5□□□□□ -1.69
SSL2Q00578 CUZ1YNL155W 825 nt4.5□□□□□ -1.69
SSL2Q00578 FMP41YNL168C 780 nt4.5□□□□□ -1.69
SSL2Q00578 ARF3YOR094W 552 nt4.5□□□□□ -1.69
SSL2Q00578 POP7YBR167C 423 nt4.5□□□□□ -1.69
SSL2Q00578 SAT4YCR008W 1812 nt4.5□□□□□ -1.69
SSL2Q00578 GAC1YOR178C 2382 nt4.5□□□□□ -1.69
SSL2Q00578 GZF3YJL110C 1656 nt4.5□□□□□ -1.69
SSL2Q00578 APP1YNL094W 1764 nt4.5□□□□□ -1.69
SSL2Q00578 GSM1YJL103C 1857 nt4.49□□□□□ -1.69
SSL2Q00578 HOM3YER052C 1584 nt4.49□□□□□ -1.69
SSL2Q00578 GDH2YDL215C 3279 nt4.49□□□□□ -1.69
SSL2Q00578 NHX1YDR456W 1902 nt4.49□□□□□ -1.69
SSL2Q00578 AIM7YDR063W 450 nt4.49□□□□□ -1.69
SSL2Q00578 YGR293CYGR293C 462 nt4.49□□□□□ -1.69
SSL2Q00578 PRS3YHL011C 963 nt4.49□□□□□ -1.69
SSL2Q00578 YIR023C-AYIR023C-A 324 nt4.49□□□□□ -1.69
SSL2Q00578 IME1YJR094C 1083 nt4.49□□□□□ -1.69
SSL2Q00578 RPP0YLR340W 939 nt4.49□□□□□ -1.69
SSL2Q00578 SYC1YOR179C 567 nt4.49□□□□□ -1.69
SSL2Q00578 YBR300CYBR300C 498 nt4.49□□□□□ -1.69
SSL2Q00578 TAF12YDR145W 1620 nt4.49□□□□□ -1.69
SSL2Q00578 POL31YJR006W 1464 nt4.49□□□□□ -1.69
SSL2Q00578 UGA3YDL170W 1587 nt4.48□□□□□ -1.69
SSL2Q00578 ACE2YLR131C 2313 nt4.48□□□□□ -1.69
SSL2Q00578 IZH3YLR023C 1632 nt4.48□□□□□ -1.69
SSL2Q00578 OCA6YDR067C 675 nt4.48□□□□□ -1.69
SSL2Q00578 GIM4YEL003W 336 nt4.48□□□□□ -1.69
SSL2Q00578 GTR2YGR163W 1026 nt4.48□□□□□ -1.69
SSL2Q00578 YBL059WYBL059W 582 nt4.48□□□□□ -1.69
SSL2Q00578 IZH2YOL002C 954 nt4.48□□□□□ -1.69
SSL2Q00578 YOL013W-BYOL013W-B 291 nt4.48□□□□□ -1.69
SSL2Q00578 DGA1YOR245C 1257 nt4.48□□□□□ -1.69
SSL2Q00578 YER077CYER077C 2067 nt4.48□□□□□ -1.69
SSL2Q00578 IDS2YJL146W 1410 nt4.47□□□□□ -1.69
SSL2Q00578 MLH2YLR035C 2088 nt4.47□□□□□ -1.69
SSL2Q00578 YLR217WYLR217W 324 nt4.47□□□□□ -1.69
SSL2Q00578 RPN13YLR421C 471 nt4.47□□□□□ -1.69
SSL2Q00578 YLR444CYLR444C 303 nt4.47□□□□□ -1.69
SSL2Q00578 YNL144W-AYNL144W-A 84 nt4.47□□□□□ -1.69
SSL2Q00578 PPT2YPL148C 522 nt4.47□□□□□ -1.69
SSL2Q00578 DSS4YPR017C 432 nt4.47□□□□□ -1.69
SSL2Q00578 TRE2YOR256C 2430 nt4.47□□□□□ -1.69
SSL2Q00578 OPT2YPR194C 2634 nt4.46□□□□□ -1.69
SSL2Q00578 RPL35BYDL136W 363 nt4.46□□□□□ -1.7
SSL2Q00578 NUS1YDL193W 1128 nt4.46□□□□□ -1.7
SSL2Q00578 GCD14YJL125C 1152 nt4.46□□□□□ -1.7
SSL2Q00578 MET14YKL001C 609 nt4.46□□□□□ -1.7
SSL2Q00578 CAP1YKL007W 807 nt4.46□□□□□ -1.7
SSL2Q00578 PRX1YBL064C 786 nt4.46□□□□□ -1.7
SSL2Q00578 PET123YOR158W 957 nt4.46□□□□□ -1.7
SSL2Q00578 YOR366WYOR366W 354 nt4.46□□□□□ -1.7
SSL2Q00578 YPR172WYPR172W 603 nt4.46□□□□□ -1.7
SSL2Q00578 MSN4YKL062W 1893 nt4.45□□□□□ -1.7
SSL2Q00578 GAT2YMR136W 1683 nt4.45□□□□□ -1.7
SSL2Q00578 YMR111CYMR111C 1389 nt4.45□□□□□ -1.7
SSL2Q00578 UBC9YDL064W 474 nt4.45□□□□□ -1.7
SSL2Q00578 SNO3YFL060C 669 nt4.45□□□□□ -1.7
SSL2Q00578 PGD1YGL025C 1194 nt4.45□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms