Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS4XP62701 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS4XP62701 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.42■□□□□ 0.7
RPS4XP62701 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RPS4XP62701 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS4XP62701 AC026310.3-201ENST00000625186 2373 ntBASIC19.41■□□□□ 0.7
RPS4XP62701 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.41■□□□□ 0.7
RPS4XP62701 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.41■□□□□ 0.7
RPS4XP62701 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.41■□□□□ 0.7
RPS4XP62701 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS4XP62701 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS4XP62701 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.41■□□□□ 0.7
RPS4XP62701 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS4XP62701 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.41■□□□□ 0.7
RPS4XP62701 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.41■□□□□ 0.7
RPS4XP62701 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPS4XP62701 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4XP62701 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4XP62701 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RPS4XP62701 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4XP62701 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.4■□□□□ 0.7
RPS4XP62701 AC104564.3-201ENST00000582367 638 ntBASIC19.4■□□□□ 0.7
RPS4XP62701 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4XP62701 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4XP62701 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4XP62701 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4XP62701 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4XP62701 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4XP62701 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4XP62701 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.4■□□□□ 0.7
RPS4XP62701 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4XP62701 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPS4XP62701 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPS4XP62701 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPS4XP62701 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS4XP62701 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.39■□□□□ 0.69
RPS4XP62701 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS4XP62701 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RPS4XP62701 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.39■□□□□ 0.69
RPS4XP62701 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.39■□□□□ 0.69
RPS4XP62701 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS4XP62701 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS4XP62701 OXCT2P1-201ENST00000447263 1535 ntBASIC19.39■□□□□ 0.69
RPS4XP62701 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPS4XP62701 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.39■□□□□ 0.69
RPS4XP62701 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RPS4XP62701 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPS4XP62701 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS4XP62701 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPS4XP62701 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.38■□□□□ 0.69
RPS4XP62701 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPS4XP62701 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RPS4XP62701 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPS4XP62701 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPS4XP62701 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.38■□□□□ 0.69
RPS4XP62701 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.38■□□□□ 0.69
RPS4XP62701 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.38■□□□□ 0.69
RPS4XP62701 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.38■□□□□ 0.69
RPS4XP62701 AC008764.7-201ENST00000593779 1081 ntBASIC19.38■□□□□ 0.69
RPS4XP62701 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.38■□□□□ 0.69
RPS4XP62701 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
RPS4XP62701 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPS4XP62701 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.38■□□□□ 0.69
RPS4XP62701 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.38■□□□□ 0.69
RPS4XP62701 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.38■□□□□ 0.69
RPS4XP62701 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS4XP62701 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.37■□□□□ 0.69
RPS4XP62701 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RPS4XP62701 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RPS4XP62701 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
RPS4XP62701 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RPS4XP62701 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPS4XP62701 SLC47A1P1-202ENST00000449666 945 ntBASIC19.37■□□□□ 0.69
RPS4XP62701 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPS4XP62701 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RPS4XP62701 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPS4XP62701 AC026471.6-201ENST00000622954 1905 ntBASIC19.37■□□□□ 0.69
RPS4XP62701 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPS4XP62701 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.37■□□□□ 0.69
RPS4XP62701 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RPS4XP62701 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4XP62701 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.36■□□□□ 0.69
RPS4XP62701 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.36■□□□□ 0.69
RPS4XP62701 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.36■□□□□ 0.69
RPS4XP62701 AL137060.1-201ENST00000618151 2648 ntBASIC19.36■□□□□ 0.69
RPS4XP62701 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4XP62701 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.36■□□□□ 0.69
RPS4XP62701 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4XP62701 AP005435.1-201ENST00000529293 1178 ntBASIC19.36■□□□□ 0.69
RPS4XP62701 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.36■□□□□ 0.69
RPS4XP62701 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
RPS4XP62701 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.36■□□□□ 0.69
RPS4XP62701 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4XP62701 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4XP62701 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4XP62701 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.36■□□□□ 0.69
RPS4XP62701 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPS4XP62701 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPS4XP62701 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RPS4XP62701 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms