Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YHR069C-AYHR069C-A 363 nt3.26□□□□□ -1.89
YNL040WP53960 DLS1YJL065C 504 nt3.26□□□□□ -1.89
YNL040WP53960 SSO2YMR183C 888 nt3.26□□□□□ -1.89
YNL040WP53960 TRI1YMR233W 681 nt3.26□□□□□ -1.89
YNL040WP53960 CMD1YBR109C 444 nt3.26□□□□□ -1.89
YNL040WP53960 snR42snR42 351 nt3.26□□□□□ -1.89
YNL040WP53960 KAP95YLR347C 2586 nt3.26□□□□□ -1.89
YNL040WP53960 VID27YNL212W 2349 nt3.26□□□□□ -1.89
YNL040WP53960 MSA1YOR066W 1890 nt3.26□□□□□ -1.89
YNL040WP53960 ULP1YPL020C 1866 nt3.26□□□□□ -1.89
YNL040WP53960 STE6YKL209C 3873 nt3.25□□□□□ -1.89
YNL040WP53960 RPC11YDR045C 333 nt3.25□□□□□ -1.89
YNL040WP53960 YJL175WYJL175W 513 nt3.25□□□□□ -1.89
YNL040WP53960 MTR2YKL186C 555 nt3.25□□□□□ -1.89
YNL040WP53960 YKT6YKL196C 603 nt3.25□□□□□ -1.89
YNL040WP53960 BLS1YLR408C 369 nt3.25□□□□□ -1.89
YNL040WP53960 TAF14YPL129W 735 nt3.25□□□□□ -1.89
YNL040WP53960 TRE2YOR256C 2430 nt3.24□□□□□ -1.89
YNL040WP53960 SMI1YGR229C 1518 nt3.24□□□□□ -1.89
YNL040WP53960 YKL050CYKL050C 2769 nt3.24□□□□□ -1.89
YNL040WP53960 VPS30YPL120W 1674 nt3.24□□□□□ -1.89
YNL040WP53960 YDL241WYDL241W 372 nt3.24□□□□□ -1.89
YNL040WP53960 HAT2YEL056W 1206 nt3.24□□□□□ -1.89
YNL040WP53960 YPT35YHR105W 645 nt3.24□□□□□ -1.89
YNL040WP53960 NDJ1YOL104C 1059 nt3.24□□□□□ -1.89
YNL040WP53960 SPS4YOR313C 1017 nt3.24□□□□□ -1.89
YNL040WP53960 YSA1YBR111C 696 nt3.24□□□□□ -1.89
YNL040WP53960 CDC40YDR364C 1368 nt3.24□□□□□ -1.89
YNL040WP53960 YHR202WYHR202W 1809 nt3.23□□□□□ -1.89
YNL040WP53960 ERB1YMR049C 2424 nt3.23□□□□□ -1.89
YNL040WP53960 YPS6YIR039C 1614 nt3.23□□□□□ -1.89
YNL040WP53960 MAL12YGR292W 1755 nt3.23□□□□□ -1.89
YNL040WP53960 MAL32YBR299W 1755 nt3.23□□□□□ -1.89
YNL040WP53960 SEA4YBL104C 3117 nt3.23□□□□□ -1.89
YNL040WP53960 GRX6YDL010W 696 nt3.23□□□□□ -1.89
YNL040WP53960 DOA4YDR069C 2781 nt3.23□□□□□ -1.89
YNL040WP53960 SER3YER081W 1410 nt3.23□□□□□ -1.89
YNL040WP53960 YGR149WYGR149W 1299 nt3.23□□□□□ -1.89
YNL040WP53960 SAY1YGR263C 1275 nt3.23□□□□□ -1.89
YNL040WP53960 YHL045WYHL045W 348 nt3.23□□□□□ -1.89
YNL040WP53960 YNL234WYNL234W 1281 nt3.23□□□□□ -1.89
YNL040WP53960 RPS7AYOR096W 573 nt3.23□□□□□ -1.89
YNL040WP53960 YOR314WYOR314W 330 nt3.23□□□□□ -1.89
YNL040WP53960 MCM16YPR046W 546 nt3.23□□□□□ -1.89
YNL040WP53960 MGR3YMR115W 1506 nt3.23□□□□□ -1.89
YNL040WP53960 NTO1YPR031W 2247 nt3.23□□□□□ -1.89
YNL040WP53960 DAP2YHR028C 2457 nt3.22□□□□□ -1.89
YNL040WP53960 ISM1YPL040C 3009 nt3.22□□□□□ -1.89
YNL040WP53960 SLM2YNL047C 1971 nt3.22□□□□□ -1.89
YNL040WP53960 YDR222WYDR222W 1248 nt3.22□□□□□ -1.89
YNL040WP53960 RPS18AYDR450W 441 nt3.22□□□□□ -1.89
YNL040WP53960 YGL041W-AYGL041W-A 465 nt3.22□□□□□ -1.89
YNL040WP53960 SCM4YGR049W 564 nt3.22□□□□□ -1.89
YNL040WP53960 CIR1YGR207C 786 nt3.22□□□□□ -1.89
YNL040WP53960 tQ(UUG)BtQ(UUG)B 72 nt3.22□□□□□ -1.89
YNL040WP53960 ATP12YJL180C 978 nt3.22□□□□□ -1.89
YNL040WP53960 AHP1YLR109W 531 nt3.22□□□□□ -1.89
YNL040WP53960 RAD10YML095C 633 nt3.22□□□□□ -1.89
YNL040WP53960 TMC1YOR052C 453 nt3.22□□□□□ -1.89
YNL040WP53960 YOR073W-AYOR073W-A 234 nt3.22□□□□□ -1.89
YNL040WP53960 MRPL37YBR268W 318 nt3.22□□□□□ -1.89
YNL040WP53960 FAR1YJL157C 2493 nt3.22□□□□□ -1.89
YNL040WP53960 FLO5YHR211W 3228 nt3.22□□□□□ -1.89
YNL040WP53960 ZDS2YML109W 2829 nt3.22□□□□□ -1.89
YNL040WP53960 EPO1YMR124W 2832 nt3.22□□□□□ -1.89
YNL040WP53960 UBP5YER144C 2418 nt3.22□□□□□ -1.89
YNL040WP53960 CLG1YGL215W 1359 nt3.22□□□□□ -1.89
YNL040WP53960 MEK1YOR351C 1494 nt3.22□□□□□ -1.89
YNL040WP53960 CHO2YGR157W 2610 nt3.22□□□□□ -1.89
YNL040WP53960 TPD3YAL016W 1908 nt3.21□□□□□ -1.9
YNL040WP53960 snR63snR63 255 nt3.21□□□□□ -1.9
YNL040WP53960 SHU2YDR078C 672 nt3.21□□□□□ -1.9
YNL040WP53960 RPC17YJL011C 486 nt3.21□□□□□ -1.9
YNL040WP53960 YPL088WYPL088W 1029 nt3.21□□□□□ -1.9
YNL040WP53960 CUE3YGL110C 1875 nt3.21□□□□□ -1.9
YNL040WP53960 MGA1YGR249W 1371 nt3.21□□□□□ -1.9
YNL040WP53960 SUC2YIL162W 1599 nt3.21□□□□□ -1.9
YNL040WP53960 VPS17YOR132W 1656 nt3.2□□□□□ -1.9
YNL040WP53960 MRPS35YGR165W 1038 nt3.2□□□□□ -1.9
YNL040WP53960 YHR180WYHR180W 492 nt3.2□□□□□ -1.9
YNL040WP53960 MAK16YAL025C 921 nt3.2□□□□□ -1.9
YNL040WP53960 HRT3YLR097C 1035 nt3.2□□□□□ -1.9
YNL040WP53960 RPN13YLR421C 471 nt3.2□□□□□ -1.9
YNL040WP53960 MRPL16YBL038W 699 nt3.2□□□□□ -1.9
YNL040WP53960 RPL20BYOR312C 519 nt3.2□□□□□ -1.9
YNL040WP53960 YIG1YPL201C 1386 nt3.2□□□□□ -1.9
YNL040WP53960 JJJ1YNL227C 1773 nt3.2□□□□□ -1.9
YNL040WP53960 NMD2YHR077C 3270 nt3.2□□□□□ -1.9
YNL040WP53960 PRM15YMR278W 1869 nt3.2□□□□□ -1.9
YNL040WP53960 YAK1YJL141C 2424 nt3.19□□□□□ -1.9
YNL040WP53960 STE14YDR410C 720 nt3.19□□□□□ -1.9
YNL040WP53960 YGR017WYGR017W 894 nt3.19□□□□□ -1.9
YNL040WP53960 CAB2YIL083C 1098 nt3.19□□□□□ -1.9
YNL040WP53960 PHD1YKL043W 1101 nt3.19□□□□□ -1.9
YNL040WP53960 YOR020W-AYOR020W-A 273 nt3.19□□□□□ -1.9
YNL040WP53960 UAF30YOR295W 687 nt3.19□□□□□ -1.9
YNL040WP53960 HPA2YPR193C 471 nt3.19□□□□□ -1.9
YNL040WP53960 TIM12YBR091C 330 nt3.19□□□□□ -1.9
YNL040WP53960 ALG1YBR110W 1350 nt3.19□□□□□ -1.9
YNL040WP53960 IMD4YML056C 1575 nt3.19□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms