Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPT1AP50416 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
CPT1AP50416 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPT1AP50416 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.96■■□□□ 1.43
CPT1AP50416 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CPT1AP50416 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CPT1AP50416 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.96■■□□□ 1.43
CPT1AP50416 SLC7A5P1-201ENST00000568957 537 ntBASIC23.96■■□□□ 1.43
CPT1AP50416 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.96■■□□□ 1.43
CPT1AP50416 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPT1AP50416 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CPT1AP50416 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.95■■□□□ 1.43
CPT1AP50416 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CPT1AP50416 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPT1AP50416 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CPT1AP50416 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.95■■□□□ 1.42
CPT1AP50416 EEF1DP3-203ENST00000566025 782 ntBASIC23.95■■□□□ 1.42
CPT1AP50416 AC013268.1-206ENST00000638368 961 ntBASIC23.95■■□□□ 1.42
CPT1AP50416 AC112229.1-201ENST00000639295 961 ntBASIC23.95■■□□□ 1.42
CPT1AP50416 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
CPT1AP50416 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CPT1AP50416 AP006587.3-201ENST00000525742 1516 ntBASIC23.94■■□□□ 1.42
CPT1AP50416 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPT1AP50416 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.94■■□□□ 1.42
CPT1AP50416 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.94■■□□□ 1.42
CPT1AP50416 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPT1AP50416 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CPT1AP50416 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CPT1AP50416 AC105036.2-201ENST00000569468 176 ntBASIC23.94■■□□□ 1.42
CPT1AP50416 AC053503.5-201ENST00000601508 636 ntBASIC23.94■■□□□ 1.42
CPT1AP50416 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.94■■□□□ 1.42
CPT1AP50416 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CPT1AP50416 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CPT1AP50416 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CPT1AP50416 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CPT1AP50416 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CPT1AP50416 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.93■■□□□ 1.42
CPT1AP50416 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.93■■□□□ 1.42
CPT1AP50416 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CPT1AP50416 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
CPT1AP50416 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CPT1AP50416 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CPT1AP50416 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CPT1AP50416 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.93■■□□□ 1.42
CPT1AP50416 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.92■■□□□ 1.42
CPT1AP50416 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPT1AP50416 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CPT1AP50416 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.92■■□□□ 1.42
CPT1AP50416 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.92■■□□□ 1.42
CPT1AP50416 AC069152.1-201ENST00000438030 544 ntBASIC23.92■■□□□ 1.42
CPT1AP50416 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CPT1AP50416 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.92■■□□□ 1.42
CPT1AP50416 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CPT1AP50416 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.92■■□□□ 1.42
CPT1AP50416 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CPT1AP50416 AC133041.1-202ENST00000642053 222 ntBASIC23.92■■□□□ 1.42
CPT1AP50416 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPT1AP50416 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CPT1AP50416 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.92■■□□□ 1.42
CPT1AP50416 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CPT1AP50416 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
CPT1AP50416 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CPT1AP50416 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CPT1AP50416 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CPT1AP50416 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CPT1AP50416 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.91■■□□□ 1.42
CPT1AP50416 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CPT1AP50416 TERF1P5-201ENST00000477545 1207 ntBASIC23.91■■□□□ 1.42
CPT1AP50416 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CPT1AP50416 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CPT1AP50416 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.91■■□□□ 1.42
CPT1AP50416 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.91■■□□□ 1.42
CPT1AP50416 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.9■■□□□ 1.42
CPT1AP50416 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.9■■□□□ 1.42
CPT1AP50416 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPT1AP50416 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPT1AP50416 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.9■■□□□ 1.42
CPT1AP50416 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CPT1AP50416 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.9■■□□□ 1.42
CPT1AP50416 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.9■■□□□ 1.42
CPT1AP50416 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CPT1AP50416 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPT1AP50416 AC073210.2-201ENST00000430369 194 ntBASIC23.9■■□□□ 1.42
CPT1AP50416 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.9■■□□□ 1.42
CPT1AP50416 TSPY20P-201ENST00000450910 630 ntBASIC23.9■■□□□ 1.42
CPT1AP50416 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CPT1AP50416 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.9■■□□□ 1.42
CPT1AP50416 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CPT1AP50416 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.9■■□□□ 1.42
CPT1AP50416 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPT1AP50416 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.9■■□□□ 1.42
CPT1AP50416 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CPT1AP50416 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CPT1AP50416 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.89■■□□□ 1.42
CPT1AP50416 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CPT1AP50416 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CPT1AP50416 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
CPT1AP50416 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CPT1AP50416 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CPT1AP50416 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms