Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
UBE2AP49459 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
UBE2AP49459 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
UBE2AP49459 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2AP49459 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UBE2AP49459 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2AP49459 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2AP49459 AL024507.2-201ENST00000606070 2574 ntBASIC13.55□□□□□ -0.24
UBE2AP49459 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2AP49459 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2AP49459 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2AP49459 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2AP49459 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
UBE2AP49459 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC13.55□□□□□ -0.24
UBE2AP49459 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2AP49459 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC13.55□□□□□ -0.24
UBE2AP49459 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC13.55□□□□□ -0.24
UBE2AP49459 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
UBE2AP49459 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2AP49459 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2AP49459 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
UBE2AP49459 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC13.55□□□□□ -0.24
UBE2AP49459 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
UBE2AP49459 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
UBE2AP49459 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
UBE2AP49459 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
UBE2AP49459 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2AP49459 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC13.54□□□□□ -0.24
UBE2AP49459 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC13.54□□□□□ -0.24
UBE2AP49459 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
UBE2AP49459 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2AP49459 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2AP49459 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2AP49459 BCL2-203ENST00000589955 5011 ntBASIC13.54□□□□□ -0.24
UBE2AP49459 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2AP49459 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2AP49459 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2AP49459 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2AP49459 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2AP49459 AL356441.2-201ENST00000443009 864 ntBASIC13.54□□□□□ -0.24
UBE2AP49459 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC13.54□□□□□ -0.24
UBE2AP49459 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.54□□□□□ -0.24
UBE2AP49459 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
UBE2AP49459 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2AP49459 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
UBE2AP49459 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
UBE2AP49459 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2AP49459 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UBE2AP49459 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 LSR-203ENST00000360798 1963 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2AP49459 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC13.53□□□□□ -0.24
UBE2AP49459 MIR3621-201ENST00000580529 85 ntBASIC13.53□□□□□ -0.24
UBE2AP49459 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC13.53□□□□□ -0.24
UBE2AP49459 AC099791.2-201ENST00000605725 427 ntBASIC13.53□□□□□ -0.24
UBE2AP49459 pRNA.6-201ENST00000610482 90 ntBASIC13.53□□□□□ -0.24
UBE2AP49459 pRNA.5-201ENST00000612139 90 ntBASIC13.53□□□□□ -0.24
UBE2AP49459 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2AP49459 pRNA.11-201ENST00000618423 90 ntBASIC13.53□□□□□ -0.24
UBE2AP49459 pRNA.13-201ENST00000619112 90 ntBASIC13.53□□□□□ -0.24
UBE2AP49459 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UBE2AP49459 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2AP49459 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
UBE2AP49459 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
UBE2AP49459 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2AP49459 AC092053.2-201ENST00000640557 1818 ntBASIC13.53□□□□□ -0.24
UBE2AP49459 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC13.52□□□□□ -0.24
UBE2AP49459 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC13.52□□□□□ -0.24
UBE2AP49459 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2AP49459 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2AP49459 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2AP49459 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC13.52□□□□□ -0.25
UBE2AP49459 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms