Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 SUC2YIL162W 1599 nt3.56□□□□□ -1.84
RTR1P40084 ALG1YBR110W 1350 nt3.56□□□□□ -1.84
RTR1P40084 RRT13YER066W 558 nt3.56□□□□□ -1.84
RTR1P40084 YHR214C-EYHR214C-E 300 nt3.56□□□□□ -1.84
RTR1P40084 ARC15YIL062C 465 nt3.56□□□□□ -1.84
RTR1P40084 YAR070CYAR070C 300 nt3.56□□□□□ -1.84
RTR1P40084 TMC1YOR052C 453 nt3.56□□□□□ -1.84
RTR1P40084 RPS12YOR369C 432 nt3.56□□□□□ -1.84
RTR1P40084 YBR238CYBR238C 2196 nt3.56□□□□□ -1.84
RTR1P40084 KTR6YPL053C 1341 nt3.55□□□□□ -1.84
RTR1P40084 RNY1YPL123C 1305 nt3.55□□□□□ -1.84
RTR1P40084 RAD55YDR076W 1221 nt3.55□□□□□ -1.84
RTR1P40084 CFD1YIL003W 882 nt3.55□□□□□ -1.84
RTR1P40084 SCD6YPR129W 1050 nt3.55□□□□□ -1.84
RTR1P40084 UBP14YBR058C 2346 nt3.55□□□□□ -1.84
RTR1P40084 PWP2YCR057C 2772 nt3.55□□□□□ -1.84
RTR1P40084 HAT2YEL056W 1206 nt3.54□□□□□ -1.84
RTR1P40084 ECO1YFR027W 846 nt3.54□□□□□ -1.84
RTR1P40084 YML037CYML037C 1023 nt3.54□□□□□ -1.84
RTR1P40084 PRE8YML092C 753 nt3.54□□□□□ -1.84
RTR1P40084 MSN1YOL116W 1149 nt3.54□□□□□ -1.84
RTR1P40084 CAF130YGR134W 3369 nt3.54□□□□□ -1.84
RTR1P40084 PRS5YOL061W 1491 nt3.54□□□□□ -1.84
RTR1P40084 NSP1YJL041W 2472 nt3.53□□□□□ -1.84
RTR1P40084 TLG1YDR468C 675 nt3.53□□□□□ -1.84
RTR1P40084 YOR331CYOR331C 558 nt3.53□□□□□ -1.84
RTR1P40084 YPR136CYPR136C 513 nt3.53□□□□□ -1.84
RTR1P40084 YJR030CYJR030C 2238 nt3.53□□□□□ -1.84
RTR1P40084 ATG13YPR185W 2217 nt3.53□□□□□ -1.84
RTR1P40084 FRE8YLR047C 2061 nt3.53□□□□□ -1.84
RTR1P40084 YEL057CYEL057C 702 nt3.52□□□□□ -1.85
RTR1P40084 YIL047C-AYIL047C-A 369 nt3.52□□□□□ -1.85
RTR1P40084 YBR116CYBR116C 528 nt3.52□□□□□ -1.85
RTR1P40084 BCH1YMR237W 2175 nt3.52□□□□□ -1.85
RTR1P40084 CEP3YMR168C 1827 nt3.51□□□□□ -1.85
RTR1P40084 GYP7YDL234C 2241 nt3.51□□□□□ -1.85
RTR1P40084 MAL12YGR292W 1755 nt3.51□□□□□ -1.85
RTR1P40084 MAL32YBR299W 1755 nt3.51□□□□□ -1.85
RTR1P40084 YDR098C-AYDR098C-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YDR210C-CYDR210C-C 1323 nt3.51□□□□□ -1.85
RTR1P40084 YDR261C-CYDR261C-C 1323 nt3.51□□□□□ -1.85
RTR1P40084 YDR316W-AYDR316W-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YDR365W-AYDR365W-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YER137C-AYER137C-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YER159C-AYER159C-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YGR027W-AYGR027W-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YGR038C-AYGR038C-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YGR161C-CYGR161C-C 1323 nt3.51□□□□□ -1.85
RTR1P40084 YJR026WYJR026W 1323 nt3.51□□□□□ -1.85
RTR1P40084 YJR028WYJR028W 1323 nt3.51□□□□□ -1.85
RTR1P40084 YAR010CYAR010C 1323 nt3.51□□□□□ -1.85
RTR1P40084 YLR157C-AYLR157C-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YLR227W-AYLR227W-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YLR256W-AYLR256W-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YML040WYML040W 1323 nt3.51□□□□□ -1.85
RTR1P40084 YML045W-AYML045W-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YMR051CYMR051C 1323 nt3.51□□□□□ -1.85
RTR1P40084 YNL054W-AYNL054W-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YOL103W-AYOL103W-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YPL257W-AYPL257W-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YPR137C-AYPR137C-A 1323 nt3.51□□□□□ -1.85
RTR1P40084 YPR158C-CYPR158C-C 1323 nt3.51□□□□□ -1.85
RTR1P40084 YDR491CYDR491C 492 nt3.51□□□□□ -1.85
RTR1P40084 YHR137C-AYHR137C-A 651 nt3.51□□□□□ -1.85
RTR1P40084 BUD4YJR092W 4344 nt3.51□□□□□ -1.85
RTR1P40084 EPO1YMR124W 2832 nt3.51□□□□□ -1.85
RTR1P40084 RAX2YLR084C 3663 nt3.5□□□□□ -1.85
RTR1P40084 PPA2YMR267W 933 nt3.5□□□□□ -1.85
RTR1P40084 ATG3YNR007C 933 nt3.5□□□□□ -1.85
RTR1P40084 RTS1YOR014W 2274 nt3.5□□□□□ -1.85
RTR1P40084 OAF3YKR064W 2592 nt3.49□□□□□ -1.85
RTR1P40084 PHO92YDR374C 921 nt3.49□□□□□ -1.85
RTR1P40084 OKP1YGR179C 1221 nt3.49□□□□□ -1.85
RTR1P40084 ERV29YGR284C 933 nt3.49□□□□□ -1.85
RTR1P40084 JIP3YLR331C 378 nt3.49□□□□□ -1.85
RTR1P40084 RPN13YLR421C 471 nt3.49□□□□□ -1.85
RTR1P40084 CPR3YML078W 549 nt3.49□□□□□ -1.85
RTR1P40084 RIB5YBR256C 717 nt3.49□□□□□ -1.85
RTR1P40084 HEF3YNL014W 3135 nt3.49□□□□□ -1.85
RTR1P40084 TFC4YGR047C 3078 nt3.49□□□□□ -1.85
RTR1P40084 MGA1YGR249W 1371 nt3.49□□□□□ -1.85
RTR1P40084 GAT2YMR136W 1683 nt3.49□□□□□ -1.85
RTR1P40084 MEF1YLR069C 2286 nt3.49□□□□□ -1.85
RTR1P40084 TMA108YIL137C 2841 nt3.48□□□□□ -1.85
RTR1P40084 PRM15YMR278W 1869 nt3.48□□□□□ -1.85
RTR1P40084 YCL068CYCL068C 783 nt3.48□□□□□ -1.85
RTR1P40084 YDR249CYDR249C 1122 nt3.48□□□□□ -1.85
RTR1P40084 YGR273CYGR273C 525 nt3.48□□□□□ -1.85
RTR1P40084 ATP12YJL180C 978 nt3.48□□□□□ -1.85
RTR1P40084 PBP2YBR233W 1242 nt3.48□□□□□ -1.85
RTR1P40084 TSC11YER093C 4293 nt3.48□□□□□ -1.85
RTR1P40084 ETP1YHL010C 1758 nt3.48□□□□□ -1.85
RTR1P40084 HDA2YDR295C 2025 nt3.48□□□□□ -1.85
RTR1P40084 DAP2YHR028C 2457 nt3.47□□□□□ -1.85
RTR1P40084 NHP10YDL002C 612 nt3.47□□□□□ -1.85
RTR1P40084 DOS2YDR068W 933 nt3.47□□□□□ -1.85
RTR1P40084 DOG1YHR044C 741 nt3.47□□□□□ -1.85
RTR1P40084 YKR033CYKR033C 426 nt3.47□□□□□ -1.85
RTR1P40084 PRE2YPR103W 864 nt3.47□□□□□ -1.85
RTR1P40084 SHE3YBR130C 1278 nt3.47□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 22.9 ms