Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 SMI1YGR229C 1518 nt3.24□□□□□ -1.89
TDA11P38854 PRM15YMR278W 1869 nt3.24□□□□□ -1.89
TDA11P38854 YPR148CYPR148C 1308 nt3.24□□□□□ -1.89
TDA11P38854 MRPS35YGR165W 1038 nt3.24□□□□□ -1.89
TDA11P38854 GTT1YIR038C 705 nt3.24□□□□□ -1.89
TDA11P38854 BUR2YLR226W 1188 nt3.24□□□□□ -1.89
TDA11P38854 YPL088WYPL088W 1029 nt3.24□□□□□ -1.89
TDA11P38854 USV1YPL230W 1176 nt3.24□□□□□ -1.89
TDA11P38854 PHO5YBR093C 1404 nt3.24□□□□□ -1.89
TDA11P38854 SUC2YIL162W 1599 nt3.24□□□□□ -1.89
TDA11P38854 CAF130YGR134W 3369 nt3.24□□□□□ -1.89
TDA11P38854 CIN8YEL061C 3003 nt3.24□□□□□ -1.89
TDA11P38854 CMK1YFR014C 1341 nt3.23□□□□□ -1.89
TDA11P38854 ACA1YER045C 1470 nt3.23□□□□□ -1.89
TDA11P38854 YDL241WYDL241W 372 nt3.23□□□□□ -1.89
TDA11P38854 DAP2YHR028C 2457 nt3.23□□□□□ -1.89
TDA11P38854 REX3YLR107W 1215 nt3.23□□□□□ -1.89
TDA11P38854 YAR075WYAR075W 474 nt3.23□□□□□ -1.89
TDA11P38854 TVP18YMR071C 504 nt3.23□□□□□ -1.89
TDA11P38854 RRG9YNL213C 645 nt3.23□□□□□ -1.89
TDA11P38854 RPS11BYBR048W 471 nt3.23□□□□□ -1.89
TDA11P38854 CHK1YBR274W 1584 nt3.23□□□□□ -1.89
TDA11P38854 CEX1YOR112W 2286 nt3.23□□□□□ -1.89
TDA11P38854 UTP25YIL091C 2166 nt3.22□□□□□ -1.89
TDA11P38854 tC(GCA)BtC(GCA)B 72 nt3.22□□□□□ -1.89
TDA11P38854 tC(GCA)GtC(GCA)G 72 nt3.22□□□□□ -1.89
TDA11P38854 tC(GCA)P1tC(GCA)P1 72 nt3.22□□□□□ -1.89
TDA11P38854 tC(GCA)P2tC(GCA)P2 72 nt3.22□□□□□ -1.89
TDA11P38854 YIL175WYIL175W 318 nt3.22□□□□□ -1.89
TDA11P38854 YJL222W-BYJL222W-B 138 nt3.22□□□□□ -1.89
TDA11P38854 YAL069WYAL069W 315 nt3.22□□□□□ -1.89
TDA11P38854 RIB5YBR256C 717 nt3.22□□□□□ -1.89
TDA11P38854 BCS1YDR375C 1371 nt3.22□□□□□ -1.89
TDA11P38854 RAD4YER162C 2265 nt3.21□□□□□ -1.9
TDA11P38854 RPS29BYDL061C 171 nt3.21□□□□□ -1.9
TDA11P38854 YDR193WYDR193W 399 nt3.21□□□□□ -1.9
TDA11P38854 YJR111CYJR111C 852 nt3.21□□□□□ -1.9
TDA11P38854 CPR8YNR028W 927 nt3.21□□□□□ -1.9
TDA11P38854 BUD21YOR078W 645 nt3.21□□□□□ -1.9
TDA11P38854 STT4YLR305C 5703 nt3.21□□□□□ -1.9
TDA11P38854 SYT1YPR095C 3681 nt3.21□□□□□ -1.9
TDA11P38854 HAP4YKL109W 1665 nt3.2□□□□□ -1.9
TDA11P38854 ZDS2YML109W 2829 nt3.2□□□□□ -1.9
TDA11P38854 CDH1YGL003C 1701 nt3.2□□□□□ -1.9
TDA11P38854 ENA2YDR039C 3276 nt3.2□□□□□ -1.9
TDA11P38854 ENA1YDR040C 3276 nt3.2□□□□□ -1.9
TDA11P38854 CTH1YDR151C 978 nt3.2□□□□□ -1.9
TDA11P38854 RMD5YDR255C 1266 nt3.2□□□□□ -1.9
TDA11P38854 TLG1YDR468C 675 nt3.2□□□□□ -1.9
TDA11P38854 YEL032C-AYEL032C-A 162 nt3.2□□□□□ -1.9
TDA11P38854 CAB2YIL083C 1098 nt3.2□□□□□ -1.9
TDA11P38854 UNG1YML021C 1080 nt3.2□□□□□ -1.9
TDA11P38854 YNL320WYNL320W 855 nt3.2□□□□□ -1.9
TDA11P38854 PFK27YOL136C 1194 nt3.2□□□□□ -1.9
TDA11P38854 IAH1YOR126C 717 nt3.2□□□□□ -1.9
TDA11P38854 YOR263CYOR263C 408 nt3.2□□□□□ -1.9
TDA11P38854 PNT1YOR266W 1272 nt3.2□□□□□ -1.9
TDA11P38854 RPL20BYOR312C 519 nt3.2□□□□□ -1.9
TDA11P38854 GPI2YPL076W 843 nt3.2□□□□□ -1.9
TDA11P38854 VPS53YJL029C 2469 nt3.2□□□□□ -1.9
TDA11P38854 YLR177WYLR177W 1887 nt3.2□□□□□ -1.9
TDA11P38854 YDL032WYDL032W 312 nt3.19□□□□□ -1.9
TDA11P38854 YDR391CYDR391C 699 nt3.19□□□□□ -1.9
TDA11P38854 RRP17YDR412W 708 nt3.19□□□□□ -1.9
TDA11P38854 MTC3YGL226W 372 nt3.19□□□□□ -1.9
TDA11P38854 DOG2YHR043C 741 nt3.19□□□□□ -1.9
TDA11P38854 IRC18YJL037W 675 nt3.19□□□□□ -1.9
TDA11P38854 TFA2YKR062W 987 nt3.19□□□□□ -1.9
TDA11P38854 ILV5YLR355C 1188 nt3.19□□□□□ -1.9
TDA11P38854 SEC14YMR079W 915 nt3.19□□□□□ -1.9
TDA11P38854 YMR294W-AYMR294W-A 360 nt3.19□□□□□ -1.9
TDA11P38854 HUT1YPL244C 1020 nt3.19□□□□□ -1.9
TDA11P38854 CHS2YBR038W 2892 nt3.19□□□□□ -1.9
TDA11P38854 SRC1YML034W 2505 nt3.19□□□□□ -1.9
TDA11P38854 RRM3YHR031C 2172 nt3.18□□□□□ -1.9
TDA11P38854 ARO1YDR127W 4767 nt3.18□□□□□ -1.9
TDA11P38854 YDL162CYDL162C 357 nt3.18□□□□□ -1.9
TDA11P38854 PDS1YDR113C 1122 nt3.18□□□□□ -1.9
TDA11P38854 MED11YMR112C 396 nt3.18□□□□□ -1.9
TDA11P38854 YOL024WYOL024W 519 nt3.18□□□□□ -1.9
TDA11P38854 YOR020W-AYOR020W-A 273 nt3.18□□□□□ -1.9
TDA11P38854 HPA2YPR193C 471 nt3.18□□□□□ -1.9
TDA11P38854 YSA1YBR111C 696 nt3.18□□□□□ -1.9
TDA11P38854 PWP2YCR057C 2772 nt3.18□□□□□ -1.9
TDA11P38854 TMA108YIL137C 2841 nt3.18□□□□□ -1.9
TDA11P38854 REC8YPR007C 2043 nt3.17□□□□□ -1.9
TDA11P38854 YDR355CYDR355C 303 nt3.17□□□□□ -1.9
TDA11P38854 DYN2YDR424C 279 nt3.17□□□□□ -1.9
TDA11P38854 SAY1YGR263C 1275 nt3.17□□□□□ -1.9
TDA11P38854 YHL045WYHL045W 348 nt3.17□□□□□ -1.9
TDA11P38854 RPC17YJL011C 486 nt3.17□□□□□ -1.9
TDA11P38854 RFC3YNL290W 1023 nt3.17□□□□□ -1.9
TDA11P38854 YNR068CYNR068C 819 nt3.17□□□□□ -1.9
TDA11P38854 POS5YPL188W 1245 nt3.17□□□□□ -1.9
TDA11P38854 CUE3YGL110C 1875 nt3.17□□□□□ -1.9
TDA11P38854 MIG1YGL035C 1515 nt3.17□□□□□ -1.9
TDA11P38854 RSF2YJR127C 4143 nt3.17□□□□□ -1.9
TDA11P38854 UBP14YBR058C 2346 nt3.16□□□□□ -1.9
TDA11P38854 YDL026WYDL026W 312 nt3.16□□□□□ -1.9
TDA11P38854 FRQ1YDR373W 573 nt3.16□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 41 ms