Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.73■■□□□ 1.87
PDE6BP35913 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PDE6BP35913 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.73■■□□□ 1.87
PDE6BP35913 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
PDE6BP35913 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC26.73■■□□□ 1.87
PDE6BP35913 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PDE6BP35913 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.73■■□□□ 1.87
PDE6BP35913 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PDE6BP35913 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.72■■□□□ 1.87
PDE6BP35913 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
PDE6BP35913 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PDE6BP35913 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDE6BP35913 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDE6BP35913 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDE6BP35913 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC26.72■■□□□ 1.87
PDE6BP35913 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC26.72■■□□□ 1.87
PDE6BP35913 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
PDE6BP35913 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC26.72■■□□□ 1.87
PDE6BP35913 AC069236.1-201ENST00000604339 616 ntBASIC26.72■■□□□ 1.87
PDE6BP35913 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDE6BP35913 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
PDE6BP35913 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDE6BP35913 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
PDE6BP35913 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE6BP35913 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE6BP35913 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.71■■□□□ 1.87
PDE6BP35913 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.71■■□□□ 1.87
PDE6BP35913 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.71■■□□□ 1.87
PDE6BP35913 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE6BP35913 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE6BP35913 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE6BP35913 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.71■■□□□ 1.87
PDE6BP35913 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PDE6BP35913 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.71■■□□□ 1.87
PDE6BP35913 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
PDE6BP35913 AC093787.1-201ENST00000450396 207 ntBASIC26.71■■□□□ 1.87
PDE6BP35913 RPS2P52-201ENST00000469610 820 ntBASIC26.71■■□□□ 1.87
PDE6BP35913 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
PDE6BP35913 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.71■■□□□ 1.87
PDE6BP35913 AC053503.5-201ENST00000601508 636 ntBASIC26.71■■□□□ 1.87
PDE6BP35913 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
PDE6BP35913 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.71■■□□□ 1.87
PDE6BP35913 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
PDE6BP35913 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE6BP35913 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
PDE6BP35913 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PDE6BP35913 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PDE6BP35913 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
PDE6BP35913 RARRES2P4-201ENST00000514074 484 ntBASIC26.7■■□□□ 1.86
PDE6BP35913 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC26.7■■□□□ 1.86
PDE6BP35913 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.7■■□□□ 1.86
PDE6BP35913 ARL16-209ENST00000573715 763 ntTSL 3 BASIC26.7■■□□□ 1.86
PDE6BP35913 ARL16-211ENST00000576135 694 ntTSL 3 BASIC26.7■■□□□ 1.86
PDE6BP35913 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.7■■□□□ 1.86
PDE6BP35913 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.7■■□□□ 1.86
PDE6BP35913 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC26.7■■□□□ 1.86
PDE6BP35913 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.7■■□□□ 1.86
PDE6BP35913 AP006294.2-201ENST00000641667 209 ntBASIC26.7■■□□□ 1.86
PDE6BP35913 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.7■■□□□ 1.86
PDE6BP35913 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PDE6BP35913 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
PDE6BP35913 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PDE6BP35913 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PDE6BP35913 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.69■■□□□ 1.86
PDE6BP35913 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
PDE6BP35913 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.69■■□□□ 1.86
PDE6BP35913 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.69■■□□□ 1.86
PDE6BP35913 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PDE6BP35913 AC016405.3-201ENST00000607710 860 ntBASIC26.69■■□□□ 1.86
PDE6BP35913 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PDE6BP35913 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
PDE6BP35913 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PDE6BP35913 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDE6BP35913 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDE6BP35913 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDE6BP35913 DUSP5P2-201ENST00000426873 1033 ntBASIC26.68■■□□□ 1.86
PDE6BP35913 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.68■■□□□ 1.86
PDE6BP35913 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.68■■□□□ 1.86
PDE6BP35913 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.68■■□□□ 1.86
PDE6BP35913 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.68■■□□□ 1.86
PDE6BP35913 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.68■■□□□ 1.86
PDE6BP35913 AL034346.1-201ENST00000568244 1277 ntBASIC26.68■■□□□ 1.86
PDE6BP35913 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PDE6BP35913 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.68■■□□□ 1.86
PDE6BP35913 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PDE6BP35913 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDE6BP35913 AC020928.2-201ENST00000588717 2197 ntBASIC26.67■■□□□ 1.86
PDE6BP35913 BX276092.2-201ENST00000417668 665 ntBASIC26.67■■□□□ 1.86
PDE6BP35913 AC098590.1-201ENST00000468126 897 ntBASIC26.67■■□□□ 1.86
PDE6BP35913 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC26.67■■□□□ 1.86
PDE6BP35913 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PDE6BP35913 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PDE6BP35913 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PDE6BP35913 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
PDE6BP35913 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PDE6BP35913 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.66■■□□□ 1.86
PDE6BP35913 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
PDE6BP35913 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.66■■□□□ 1.86
PDE6BP35913 AC083880.1-201ENST00000608266 535 ntBASIC26.66■■□□□ 1.86
PDE6BP35913 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms