Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.59■□□□□ 0.89
PTX3P26022 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTX3P26022 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTX3P26022 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTX3P26022 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTX3P26022 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTX3P26022 AC099791.1-201ENST00000416440 715 ntBASIC20.59■□□□□ 0.89
PTX3P26022 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.59■□□□□ 0.89
PTX3P26022 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.59■□□□□ 0.89
PTX3P26022 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTX3P26022 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTX3P26022 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTX3P26022 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PTX3P26022 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PTX3P26022 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTX3P26022 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PTX3P26022 IGHV3-19-201ENST00000521488 291 ntBASIC20.58■□□□□ 0.89
PTX3P26022 AL034346.1-201ENST00000568244 1277 ntBASIC20.58■□□□□ 0.89
PTX3P26022 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.58■□□□□ 0.89
PTX3P26022 AL139246.5-201ENST00000606645 996 ntBASIC20.58■□□□□ 0.89
PTX3P26022 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.58■□□□□ 0.89
PTX3P26022 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PTX3P26022 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTX3P26022 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTX3P26022 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.58■□□□□ 0.88
PTX3P26022 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PTX3P26022 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTX3P26022 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.57■□□□□ 0.88
PTX3P26022 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.57■□□□□ 0.88
PTX3P26022 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTX3P26022 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTX3P26022 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.57■□□□□ 0.88
PTX3P26022 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.57■□□□□ 0.88
PTX3P26022 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PTX3P26022 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PTX3P26022 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTX3P26022 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTX3P26022 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.57■□□□□ 0.88
PTX3P26022 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.57■□□□□ 0.88
PTX3P26022 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PTX3P26022 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTX3P26022 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTX3P26022 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTX3P26022 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PTX3P26022 FBXW4P1-201ENST00000426721 2239 ntBASIC20.56■□□□□ 0.88
PTX3P26022 AP001330.3-201ENST00000520123 633 ntBASIC20.56■□□□□ 0.88
PTX3P26022 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.56■□□□□ 0.88
PTX3P26022 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.56■□□□□ 0.88
PTX3P26022 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PTX3P26022 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PTX3P26022 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.56■□□□□ 0.88
PTX3P26022 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.56■□□□□ 0.88
PTX3P26022 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.56■□□□□ 0.88
PTX3P26022 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.56■□□□□ 0.88
PTX3P26022 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTX3P26022 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.56■□□□□ 0.88
PTX3P26022 RASA4CP-201ENST00000424092 1398 ntBASIC20.56■□□□□ 0.88
PTX3P26022 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PTX3P26022 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTX3P26022 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PTX3P26022 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
PTX3P26022 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTX3P26022 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.55■□□□□ 0.88
PTX3P26022 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PTX3P26022 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.55■□□□□ 0.88
PTX3P26022 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.55■□□□□ 0.88
PTX3P26022 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTX3P26022 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTX3P26022 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTX3P26022 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PTX3P26022 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PTX3P26022 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
PTX3P26022 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTX3P26022 AP004607.7-201ENST00000527152 1677 ntBASIC20.54■□□□□ 0.88
PTX3P26022 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTX3P26022 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PTX3P26022 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTX3P26022 MIR939-201ENST00000401314 82 ntBASIC20.54■□□□□ 0.88
PTX3P26022 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.54■□□□□ 0.88
PTX3P26022 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PTX3P26022 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.54■□□□□ 0.88
PTX3P26022 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.54■□□□□ 0.88
PTX3P26022 AL136967.2-201ENST00000623968 743 ntBASIC20.54■□□□□ 0.88
PTX3P26022 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.54■□□□□ 0.88
PTX3P26022 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PTX3P26022 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTX3P26022 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTX3P26022 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTX3P26022 AC010542.4-201ENST00000563151 1910 ntBASIC20.53■□□□□ 0.88
PTX3P26022 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.53■□□□□ 0.88
PTX3P26022 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTX3P26022 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTX3P26022 AC091305.1-201ENST00000479476 895 ntBASIC20.53■□□□□ 0.88
PTX3P26022 AF213884.3-201ENST00000563833 479 ntBASIC20.53■□□□□ 0.88
PTX3P26022 AL031432.3-201ENST00000607698 485 ntBASIC20.53■□□□□ 0.88
PTX3P26022 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PTX3P26022 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTX3P26022 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.53■□□□□ 0.88
PTX3P26022 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTX3P26022 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms