Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DOBP13765 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DOBP13765 MIR939-201ENST00000401314 82 ntBASIC19.26■□□□□ 0.67
HLA-DOBP13765 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.26■□□□□ 0.67
HLA-DOBP13765 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DOBP13765 AL136967.2-201ENST00000623968 743 ntBASIC19.26■□□□□ 0.67
HLA-DOBP13765 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DOBP13765 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.26■□□□□ 0.67
HLA-DOBP13765 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DOBP13765 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DOBP13765 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DOBP13765 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HLA-DOBP13765 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DOBP13765 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.25■□□□□ 0.67
HLA-DOBP13765 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.25■□□□□ 0.67
HLA-DOBP13765 IGHV3-19-201ENST00000521488 291 ntBASIC19.25■□□□□ 0.67
HLA-DOBP13765 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-DOBP13765 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DOBP13765 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DOBP13765 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DOBP13765 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DOBP13765 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DOBP13765 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DOBP13765 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-DOBP13765 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DOBP13765 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DOBP13765 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HLA-DOBP13765 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DOBP13765 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DOBP13765 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.24■□□□□ 0.67
HLA-DOBP13765 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.24■□□□□ 0.67
HLA-DOBP13765 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.24■□□□□ 0.67
HLA-DOBP13765 SUDS3P1-201ENST00000505831 966 ntBASIC19.24■□□□□ 0.67
HLA-DOBP13765 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-DOBP13765 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-DOBP13765 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DOBP13765 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-DOBP13765 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-DOBP13765 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DOBP13765 TSPY26P-201ENST00000476365 1326 ntBASIC19.24■□□□□ 0.67
HLA-DOBP13765 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-DOBP13765 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-DOBP13765 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DOBP13765 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HLA-DOBP13765 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DOBP13765 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HLA-DOBP13765 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DOBP13765 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DOBP13765 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DOBP13765 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DOBP13765 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DOBP13765 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DOBP13765 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HLA-DOBP13765 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DOBP13765 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DOBP13765 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DOBP13765 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DOBP13765 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DOBP13765 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HLA-DOBP13765 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DOBP13765 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DOBP13765 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DOBP13765 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-DOBP13765 RASA4CP-201ENST00000424092 1398 ntBASIC19.22■□□□□ 0.67
HLA-DOBP13765 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DOBP13765 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DOBP13765 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DOBP13765 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-DOBP13765 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-DOBP13765 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DOBP13765 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.22■□□□□ 0.67
HLA-DOBP13765 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HLA-DOBP13765 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DOBP13765 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DOBP13765 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DOBP13765 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DOBP13765 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DOBP13765 CLDN5-201ENST00000403084 2357 ntBASIC19.21■□□□□ 0.67
HLA-DOBP13765 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DOBP13765 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DOBP13765 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DOBP13765 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DOBP13765 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DOBP13765 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DOBP13765 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HLA-DOBP13765 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DOBP13765 AC091305.1-201ENST00000479476 895 ntBASIC19.21■□□□□ 0.67
HLA-DOBP13765 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
HLA-DOBP13765 SMUG1P1-201ENST00000590640 811 ntBASIC19.21■□□□□ 0.67
HLA-DOBP13765 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DOBP13765 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.21■□□□□ 0.67
HLA-DOBP13765 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DOBP13765 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DOBP13765 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DOBP13765 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DOBP13765 AP004607.7-201ENST00000527152 1677 ntBASIC19.2■□□□□ 0.66
HLA-DOBP13765 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DOBP13765 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DOBP13765 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DOBP13765 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms