Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SP9P0CG40 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.47■■□□□ 1.03
SP9P0CG40 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SP9P0CG40 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
SP9P0CG40 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.47■■□□□ 1.03
SP9P0CG40 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.47■■□□□ 1.03
SP9P0CG40 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SP9P0CG40 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.47■■□□□ 1.03
SP9P0CG40 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.47■■□□□ 1.03
SP9P0CG40 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SP9P0CG40 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SP9P0CG40 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.46■■□□□ 1.03
SP9P0CG40 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SP9P0CG40 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SP9P0CG40 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SP9P0CG40 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SP9P0CG40 MIR718-201ENST00000390190 70 ntBASIC21.46■■□□□ 1.03
SP9P0CG40 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SP9P0CG40 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SP9P0CG40 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SP9P0CG40 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SP9P0CG40 AL359736.2-201ENST00000621992 437 ntBASIC21.46■■□□□ 1.03
SP9P0CG40 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SP9P0CG40 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SP9P0CG40 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SP9P0CG40 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SP9P0CG40 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SP9P0CG40 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SP9P0CG40 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SP9P0CG40 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SP9P0CG40 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SP9P0CG40 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.45■■□□□ 1.02
SP9P0CG40 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SP9P0CG40 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.45■■□□□ 1.02
SP9P0CG40 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.45■■□□□ 1.02
SP9P0CG40 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.45■■□□□ 1.02
SP9P0CG40 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.45■■□□□ 1.02
SP9P0CG40 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.45■■□□□ 1.02
SP9P0CG40 AC010331.1-201ENST00000611423 582 ntBASIC21.45■■□□□ 1.02
SP9P0CG40 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SP9P0CG40 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SP9P0CG40 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.45■■□□□ 1.02
SP9P0CG40 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SP9P0CG40 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SP9P0CG40 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SP9P0CG40 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SP9P0CG40 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
SP9P0CG40 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SP9P0CG40 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.44■■□□□ 1.02
SP9P0CG40 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.44■■□□□ 1.02
SP9P0CG40 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SP9P0CG40 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SP9P0CG40 MIR4497-201ENST00000583208 89 ntBASIC21.44■■□□□ 1.02
SP9P0CG40 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.44■■□□□ 1.02
SP9P0CG40 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SP9P0CG40 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.44■■□□□ 1.02
SP9P0CG40 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SP9P0CG40 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SP9P0CG40 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SP9P0CG40 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SP9P0CG40 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SP9P0CG40 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SP9P0CG40 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SP9P0CG40 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SP9P0CG40 AC211429.1-201ENST00000415277 523 ntBASIC21.43■■□□□ 1.02
SP9P0CG40 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.43■■□□□ 1.02
SP9P0CG40 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.43■■□□□ 1.02
SP9P0CG40 AC010980.2-201ENST00000587099 1412 ntBASIC21.43■■□□□ 1.02
SP9P0CG40 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.43■■□□□ 1.02
SP9P0CG40 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SP9P0CG40 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SP9P0CG40 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SP9P0CG40 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SP9P0CG40 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SP9P0CG40 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SP9P0CG40 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SP9P0CG40 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.42■■□□□ 1.02
SP9P0CG40 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.42■■□□□ 1.02
SP9P0CG40 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.42■■□□□ 1.02
SP9P0CG40 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.42■■□□□ 1.02
SP9P0CG40 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SP9P0CG40 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SP9P0CG40 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SP9P0CG40 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.42■■□□□ 1.02
SP9P0CG40 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.42■■□□□ 1.02
SP9P0CG40 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SP9P0CG40 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.42■■□□□ 1.02
SP9P0CG40 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SP9P0CG40 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.42■■□□□ 1.02
SP9P0CG40 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SP9P0CG40 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SP9P0CG40 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.41■■□□□ 1.02
SP9P0CG40 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.41■■□□□ 1.02
SP9P0CG40 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SP9P0CG40 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.41■■□□□ 1.02
SP9P0CG40 EEF1DP3-203ENST00000566025 782 ntBASIC21.41■■□□□ 1.02
SP9P0CG40 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.41■■□□□ 1.02
SP9P0CG40 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.41■■□□□ 1.02
SP9P0CG40 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SP9P0CG40 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms