Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFAP04085 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFAP04085 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDGFAP04085 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PDGFAP04085 AL353803.4-201ENST00000565882 1934 ntBASIC20.02■□□□□ 0.79
PDGFAP04085 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFAP04085 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFAP04085 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.01■□□□□ 0.79
PDGFAP04085 AC142086.2-201ENST00000569753 217 ntBASIC20.01■□□□□ 0.79
PDGFAP04085 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.01■□□□□ 0.79
PDGFAP04085 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFAP04085 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.01■□□□□ 0.79
PDGFAP04085 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFAP04085 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.01■□□□□ 0.79
PDGFAP04085 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFAP04085 OXCT2P1-201ENST00000447263 1535 ntBASIC20.01■□□□□ 0.79
PDGFAP04085 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.01■□□□□ 0.79
PDGFAP04085 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDGFAP04085 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PDGFAP04085 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFAP04085 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFAP04085 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFAP04085 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFAP04085 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDGFAP04085 TSPY20P-201ENST00000450910 630 ntBASIC20■□□□□ 0.79
PDGFAP04085 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFAP04085 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDGFAP04085 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
PDGFAP04085 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFAP04085 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDGFAP04085 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDGFAP04085 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.99■□□□□ 0.79
PDGFAP04085 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFAP04085 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFAP04085 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFAP04085 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFAP04085 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.99■□□□□ 0.79
PDGFAP04085 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
PDGFAP04085 AC104187.1-201ENST00000607510 612 ntBASIC19.99■□□□□ 0.79
PDGFAP04085 C9orf163-202ENST00000624034 2573 ntBASIC19.99■□□□□ 0.79
PDGFAP04085 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.99■□□□□ 0.79
PDGFAP04085 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFAP04085 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDGFAP04085 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PDGFAP04085 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFAP04085 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.98■□□□□ 0.79
PDGFAP04085 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFAP04085 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.98■□□□□ 0.79
PDGFAP04085 GUSBP6-202ENST00000438529 1198 ntBASIC19.98■□□□□ 0.79
PDGFAP04085 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.98■□□□□ 0.79
PDGFAP04085 AC083906.2-201ENST00000511578 360 ntBASIC19.98■□□□□ 0.79
PDGFAP04085 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.98■□□□□ 0.79
PDGFAP04085 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.98■□□□□ 0.79
PDGFAP04085 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.98■□□□□ 0.79
PDGFAP04085 AL121832.2-201ENST00000610979 668 ntBASIC19.98■□□□□ 0.79
PDGFAP04085 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFAP04085 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFAP04085 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDGFAP04085 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFAP04085 AL121603.2-201ENST00000557373 2117 ntBASIC19.97■□□□□ 0.79
PDGFAP04085 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PDGFAP04085 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.97■□□□□ 0.79
PDGFAP04085 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PDGFAP04085 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFAP04085 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFAP04085 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.97■□□□□ 0.79
PDGFAP04085 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFAP04085 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PDGFAP04085 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFAP04085 TSPY6P-201ENST00000448518 926 ntBASIC19.97■□□□□ 0.79
PDGFAP04085 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PDGFAP04085 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.97■□□□□ 0.79
PDGFAP04085 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFAP04085 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFAP04085 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.97■□□□□ 0.79
PDGFAP04085 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFAP04085 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PDGFAP04085 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFAP04085 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFAP04085 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.96■□□□□ 0.79
PDGFAP04085 DUX4L16-201ENST00000555130 1264 ntBASIC19.96■□□□□ 0.79
PDGFAP04085 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFAP04085 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFAP04085 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFAP04085 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PDGFAP04085 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFAP04085 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PDGFAP04085 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFAP04085 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PDGFAP04085 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFAP04085 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFAP04085 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PDGFAP04085 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.95■□□□□ 0.78
PDGFAP04085 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFAP04085 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
PDGFAP04085 SLC7A5P2-201ENST00000553010 536 ntBASIC19.95■□□□□ 0.78
PDGFAP04085 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.95■□□□□ 0.78
PDGFAP04085 AL138781.1-201ENST00000566567 1274 ntBASIC19.95■□□□□ 0.78
PDGFAP04085 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.95■□□□□ 0.78
PDGFAP04085 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms