Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC080038.1-201ENST00000611274 1154 ntBASIC21.95■■□□□ 1.1
TOP3BO95985 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
TOP3BO95985 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.95■■□□□ 1.1
TOP3BO95985 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TOP3BO95985 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP3BO95985 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP3BO95985 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP3BO95985 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.94■■□□□ 1.1
TOP3BO95985 TMEM191A-211ENST00000637163 1067 ntBASIC21.94■■□□□ 1.1
TOP3BO95985 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP3BO95985 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP3BO95985 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.94■■□□□ 1.1
TOP3BO95985 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TOP3BO95985 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TOP3BO95985 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.94■■□□□ 1.1
TOP3BO95985 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TOP3BO95985 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.94■■□□□ 1.1
TOP3BO95985 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.93■■□□□ 1.1
TOP3BO95985 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
TOP3BO95985 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
TOP3BO95985 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TOP3BO95985 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TOP3BO95985 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
TOP3BO95985 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TOP3BO95985 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.93■■□□□ 1.1
TOP3BO95985 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TOP3BO95985 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.93■■□□□ 1.1
TOP3BO95985 KRT18P14-201ENST00000534205 1250 ntBASIC21.93■■□□□ 1.1
TOP3BO95985 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.93■■□□□ 1.1
TOP3BO95985 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
TOP3BO95985 AL358852.1-201ENST00000623174 1268 ntBASIC21.93■■□□□ 1.1
TOP3BO95985 AC066615.1-201ENST00000640911 628 ntBASIC21.93■■□□□ 1.1
TOP3BO95985 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TOP3BO95985 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TOP3BO95985 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.92■■□□□ 1.1
TOP3BO95985 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.92■■□□□ 1.1
TOP3BO95985 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
TOP3BO95985 AC241377.3-202ENST00000626088 1088 ntBASIC21.92■■□□□ 1.1
TOP3BO95985 AC241585.3-202ENST00000628937 1088 ntBASIC21.92■■□□□ 1.1
TOP3BO95985 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.92■■□□□ 1.1
TOP3BO95985 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TOP3BO95985 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP3BO95985 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TOP3BO95985 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TOP3BO95985 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TOP3BO95985 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.91■■□□□ 1.1
TOP3BO95985 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.91■■□□□ 1.1
TOP3BO95985 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TOP3BO95985 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.91■■□□□ 1.1
TOP3BO95985 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TOP3BO95985 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.91■■□□□ 1.1
TOP3BO95985 AC009086.3-201ENST00000623486 1008 ntBASIC21.91■■□□□ 1.1
TOP3BO95985 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
TOP3BO95985 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
TOP3BO95985 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.9■■□□□ 1.1
TOP3BO95985 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TOP3BO95985 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.9■■□□□ 1.1
TOP3BO95985 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TOP3BO95985 RAP2CP1-201ENST00000605103 478 ntBASIC21.9■■□□□ 1.1
TOP3BO95985 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TOP3BO95985 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TOP3BO95985 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
TOP3BO95985 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
TOP3BO95985 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.89■■□□□ 1.1
TOP3BO95985 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TOP3BO95985 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.89■■□□□ 1.09
TOP3BO95985 AC012414.1-201ENST00000556676 535 ntBASIC21.89■■□□□ 1.09
TOP3BO95985 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TOP3BO95985 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.89■■□□□ 1.09
TOP3BO95985 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TOP3BO95985 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.89■■□□□ 1.09
TOP3BO95985 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TOP3BO95985 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.88■■□□□ 1.09
TOP3BO95985 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TOP3BO95985 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.88■■□□□ 1.09
TOP3BO95985 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.88■■□□□ 1.09
TOP3BO95985 AC104771.1-201ENST00000603335 964 ntBASIC21.88■■□□□ 1.09
TOP3BO95985 LINC01529-204ENST00000636474 1715 ntBASIC21.88■■□□□ 1.09
TOP3BO95985 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.87■■□□□ 1.09
TOP3BO95985 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TOP3BO95985 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TOP3BO95985 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TOP3BO95985 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
TOP3BO95985 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
TOP3BO95985 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.87■■□□□ 1.09
TOP3BO95985 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.87■■□□□ 1.09
TOP3BO95985 CDCA4P2-201ENST00000441182 718 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms