Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.16■□□□□ 0.34
NDUFA3O95167 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA3O95167 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NDUFA3O95167 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA3O95167 AC105233.4-201ENST00000642045 216 ntBASIC17.16■□□□□ 0.34
NDUFA3O95167 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA3O95167 FAM99A-202ENST00000538190 1989 ntBASIC17.16■□□□□ 0.34
NDUFA3O95167 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA3O95167 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA3O95167 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.16■□□□□ 0.34
NDUFA3O95167 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA3O95167 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NDUFA3O95167 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NDUFA3O95167 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFA3O95167 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NDUFA3O95167 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NDUFA3O95167 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.15■□□□□ 0.34
NDUFA3O95167 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.15■□□□□ 0.34
NDUFA3O95167 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFA3O95167 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
NDUFA3O95167 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFA3O95167 AP004607.7-201ENST00000527152 1677 ntBASIC17.15■□□□□ 0.34
NDUFA3O95167 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NDUFA3O95167 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFA3O95167 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA3O95167 PKD1P6-201ENST00000343738 4769 ntBASIC17.15■□□□□ 0.34
NDUFA3O95167 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.14■□□□□ 0.34
NDUFA3O95167 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NDUFA3O95167 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA3O95167 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA3O95167 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA3O95167 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA3O95167 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA3O95167 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
NDUFA3O95167 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NDUFA3O95167 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA3O95167 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA3O95167 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFA3O95167 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA3O95167 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFA3O95167 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.14■□□□□ 0.33
NDUFA3O95167 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.14■□□□□ 0.33
NDUFA3O95167 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.14■□□□□ 0.33
NDUFA3O95167 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA3O95167 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.14■□□□□ 0.33
NDUFA3O95167 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA3O95167 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA3O95167 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA3O95167 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA3O95167 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA3O95167 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA3O95167 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFA3O95167 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA3O95167 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFA3O95167 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
NDUFA3O95167 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.13■□□□□ 0.33
NDUFA3O95167 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.13■□□□□ 0.33
NDUFA3O95167 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFA3O95167 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.13■□□□□ 0.33
NDUFA3O95167 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA3O95167 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA3O95167 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA3O95167 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA3O95167 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NDUFA3O95167 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NDUFA3O95167 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA3O95167 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA3O95167 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA3O95167 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA3O95167 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA3O95167 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NDUFA3O95167 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA3O95167 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA3O95167 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA3O95167 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NDUFA3O95167 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA3O95167 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA3O95167 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFA3O95167 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.12■□□□□ 0.33
NDUFA3O95167 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA3O95167 AC105265.2-201ENST00000467189 838 ntBASIC17.12■□□□□ 0.33
NDUFA3O95167 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFA3O95167 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA3O95167 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
NDUFA3O95167 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA3O95167 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA3O95167 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
NDUFA3O95167 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms