Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
NCK2O43639 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
NCK2O43639 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
NCK2O43639 AC137767.1-201ENST00000602918 1920 ntBASIC23.67■■□□□ 1.38
NCK2O43639 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NCK2O43639 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.67■■□□□ 1.38
NCK2O43639 ABHD17AP1-201ENST00000358206 933 ntBASIC23.67■■□□□ 1.38
NCK2O43639 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.67■■□□□ 1.38
NCK2O43639 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.67■■□□□ 1.38
NCK2O43639 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NCK2O43639 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NCK2O43639 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.67■■□□□ 1.38
NCK2O43639 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NCK2O43639 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.67■■□□□ 1.38
NCK2O43639 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
NCK2O43639 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
NCK2O43639 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NCK2O43639 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.66■■□□□ 1.38
NCK2O43639 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NCK2O43639 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NCK2O43639 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
NCK2O43639 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.66■■□□□ 1.38
NCK2O43639 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.66■■□□□ 1.38
NCK2O43639 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.66■■□□□ 1.38
NCK2O43639 AC105233.4-201ENST00000642045 216 ntBASIC23.66■■□□□ 1.38
NCK2O43639 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.66■■□□□ 1.38
NCK2O43639 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
NCK2O43639 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NCK2O43639 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.66■■□□□ 1.38
NCK2O43639 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NCK2O43639 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
NCK2O43639 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.66■■□□□ 1.38
NCK2O43639 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NCK2O43639 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NCK2O43639 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NCK2O43639 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NCK2O43639 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.65■■□□□ 1.38
NCK2O43639 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
NCK2O43639 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
NCK2O43639 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.65■■□□□ 1.38
NCK2O43639 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.65■■□□□ 1.38
NCK2O43639 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.65■■□□□ 1.38
NCK2O43639 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NCK2O43639 AC104771.1-201ENST00000603335 964 ntBASIC23.65■■□□□ 1.38
NCK2O43639 TMEM191A-211ENST00000637163 1067 ntBASIC23.65■■□□□ 1.38
NCK2O43639 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NCK2O43639 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
NCK2O43639 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.65■■□□□ 1.38
NCK2O43639 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NCK2O43639 ESRRAP2-201ENST00000418437 1549 ntBASIC23.64■■□□□ 1.38
NCK2O43639 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NCK2O43639 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NCK2O43639 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.64■■□□□ 1.37
NCK2O43639 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.64■■□□□ 1.37
NCK2O43639 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.64■■□□□ 1.37
NCK2O43639 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.64■■□□□ 1.37
NCK2O43639 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NCK2O43639 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.64■■□□□ 1.37
NCK2O43639 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.64■■□□□ 1.37
NCK2O43639 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.64■■□□□ 1.37
NCK2O43639 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NCK2O43639 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NCK2O43639 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.63■■□□□ 1.37
NCK2O43639 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NCK2O43639 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NCK2O43639 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.63■■□□□ 1.37
NCK2O43639 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.63■■□□□ 1.37
NCK2O43639 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NCK2O43639 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NCK2O43639 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NCK2O43639 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NCK2O43639 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.63■■□□□ 1.37
NCK2O43639 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NCK2O43639 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NCK2O43639 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NCK2O43639 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.63■■□□□ 1.37
NCK2O43639 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
NCK2O43639 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
NCK2O43639 AL353803.4-201ENST00000565882 1934 ntBASIC23.63■■□□□ 1.37
NCK2O43639 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NCK2O43639 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NCK2O43639 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NCK2O43639 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
NCK2O43639 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
NCK2O43639 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.62■■□□□ 1.37
NCK2O43639 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.62■■□□□ 1.37
NCK2O43639 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.62■■□□□ 1.37
NCK2O43639 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.62■■□□□ 1.37
NCK2O43639 BID-214ENST00000617586 542 ntTSL 5 BASIC23.62■■□□□ 1.37
NCK2O43639 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NCK2O43639 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.62■■□□□ 1.37
NCK2O43639 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NCK2O43639 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NCK2O43639 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NCK2O43639 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NCK2O43639 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.62■■□□□ 1.37
NCK2O43639 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
NCK2O43639 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
NCK2O43639 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NCK2O43639 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms