Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF11O14788 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF11O14788 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF11O14788 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF11O14788 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF11O14788 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TNFSF11O14788 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF11O14788 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFSF11O14788 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFSF11O14788 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFSF11O14788 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFSF11O14788 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF11O14788 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF11O14788 AC005224.4-201ENST00000583262 1652 ntBASIC19.29■□□□□ 0.68
TNFSF11O14788 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF11O14788 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFSF11O14788 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TNFSF11O14788 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF11O14788 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TNFSF11O14788 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFSF11O14788 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF11O14788 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFSF11O14788 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF11O14788 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF11O14788 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF11O14788 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF11O14788 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF11O14788 KRT18P14-201ENST00000534205 1250 ntBASIC19.28■□□□□ 0.68
TNFSF11O14788 TERF1P2-201ENST00000583350 1212 ntBASIC19.28■□□□□ 0.68
TNFSF11O14788 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF11O14788 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF11O14788 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TNFSF11O14788 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFSF11O14788 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF11O14788 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF11O14788 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TNFSF11O14788 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF11O14788 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF11O14788 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFSF11O14788 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF11O14788 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF11O14788 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFSF11O14788 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFSF11O14788 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF11O14788 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TNFSF11O14788 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF11O14788 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.27■□□□□ 0.68
TNFSF11O14788 AC034268.1-201ENST00000441047 882 ntBASIC19.27■□□□□ 0.68
TNFSF11O14788 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF11O14788 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.27■□□□□ 0.68
TNFSF11O14788 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF11O14788 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF11O14788 AC092053.2-201ENST00000640557 1818 ntBASIC19.27■□□□□ 0.68
TNFSF11O14788 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
TNFSF11O14788 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TNFSF11O14788 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNFSF11O14788 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TNFSF11O14788 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.27■□□□□ 0.67
TNFSF11O14788 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
TNFSF11O14788 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF11O14788 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF11O14788 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF11O14788 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF11O14788 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF11O14788 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF11O14788 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF11O14788 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF11O14788 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
TNFSF11O14788 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.26■□□□□ 0.67
TNFSF11O14788 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF11O14788 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF11O14788 DUX4L2-201ENST00000561772 1275 ntBASIC19.26■□□□□ 0.67
TNFSF11O14788 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
TNFSF11O14788 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.26■□□□□ 0.67
TNFSF11O14788 DUX4L6-201ENST00000626483 1275 ntBASIC19.26■□□□□ 0.67
TNFSF11O14788 DUX4L1-201ENST00000627662 1275 ntBASIC19.26■□□□□ 0.67
TNFSF11O14788 DUX4L8-201ENST00000629013 1275 ntBASIC19.26■□□□□ 0.67
TNFSF11O14788 DUX4L3-201ENST00000630187 1275 ntBASIC19.26■□□□□ 0.67
TNFSF11O14788 DUX4L7-201ENST00000630678 1275 ntBASIC19.26■□□□□ 0.67
TNFSF11O14788 DUX4L5-201ENST00000630834 1275 ntBASIC19.26■□□□□ 0.67
TNFSF11O14788 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFSF11O14788 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TNFSF11O14788 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.25■□□□□ 0.67
TNFSF11O14788 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.25■□□□□ 0.67
TNFSF11O14788 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
TNFSF11O14788 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.25■□□□□ 0.67
TNFSF11O14788 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.25■□□□□ 0.67
TNFSF11O14788 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.25■□□□□ 0.67
TNFSF11O14788 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF11O14788 AL117328.2-201ENST00000624617 1940 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms