Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav3n-3A0A0G2JEM0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Gm7143-201ENSMUST00000222811 859 ntBASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.31□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Cap2-205ENSMUST00000225824 1634 ntBASIC14.3□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3n-3A0A0G2JEM0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.29□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav3n-3A0A0G2JEM0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav3n-3A0A0G2JEM0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3n-3A0A0G2JEM0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms