Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 TERF1P2-201ENST00000583350 1212 ntBASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 AC073130.3-201ENST00000624389 2278 ntBASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV20A0A0B4J274 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRAV20A0A0B4J274 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 AC087239.1-201ENST00000622671 572 ntBASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV20A0A0B4J274 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV20A0A0B4J274 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV20A0A0B4J274 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV20A0A0B4J274 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV20A0A0B4J274 DUSP8P5-201ENST00000422884 1815 ntBASIC18.14■□□□□ 0.5
TRAV20A0A0B4J274 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 NTF6G-201ENST00000591094 616 ntBASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 IKBKGP1-201ENST00000612193 1073 ntBASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV20A0A0B4J274 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 LINC01124-201ENST00000409786 2117 ntBASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV20A0A0B4J274 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 RARRES2P11-201ENST00000635158 484 ntBASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV20A0A0B4J274 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms