Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Gm10849-201ENSMUST00000100397 618 ntBASIC15.75■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.75■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Gm27405-201ENSMUST00000184201 112 ntBASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Gm7291-201ENSMUST00000199147 382 ntBASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv9-3A0A0B4J1J5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Ighv9-3A0A0B4J1J5 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.72■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv9-3A0A0B4J1J5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.7■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Gm13146-201ENSMUST00000118508 780 ntBASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Gm7514-201ENSMUST00000209475 934 ntBASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv9-3A0A0B4J1J5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms