Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4n-4A0A075B615 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4n-4A0A075B615 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4n-4A0A075B615 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav4n-4A0A075B615 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav4n-4A0A075B615 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trav4n-4A0A075B615 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4n-4A0A075B615 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Mir6236-201ENSMUST00000184437 123 ntBASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav4n-4A0A075B615 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4n-4A0A075B615 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4n-4A0A075B615 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms