Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RAD51D-202ENST00000345365 9988 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 ZNF423-204ENST00000562520 4018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 PLIN5-206ENST00000592610 1903 ntBASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 FAM86FP-201ENST00000338711 969 ntBASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 SPANXD-201ENST00000370515 682 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 C10orf99-201ENST00000372126 888 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 HDAC8-201ENST00000373554 833 ntTSL 2 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 AL355357.1-203ENST00000402154 639 ntBASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 PHKG1P4-201ENST00000430144 370 ntBASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 DICER1-AS1-201ENST00000435343 723 ntTSL 3 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 AL135929.2-201ENST00000445687 505 ntBASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 LINC02051-201ENST00000456535 690 ntTSL 3 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 AC233724.7-201ENST00000511476 253 ntBASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 HNRNPA3P13-201ENST00000512222 1122 ntBASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 GFRA2-203ENST00000517892 1176 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 PTDSS1-206ENST00000522072 1112 ntTSL 2 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 CD63-212ENST00000552067 621 ntTSL 5 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 AC027237.4-201ENST00000560870 694 ntTSL 3 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 AC091132.3-201ENST00000579701 470 ntBASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 AC138645.1-201ENST00000582765 470 ntBASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 CTBP2P7-201ENST00000593270 1244 ntBASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 DAPK1-213ENST00000491893 4186 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 FGD3-202ENST00000375482 3321 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 MAN2A2-201ENST00000360468 6268 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 NRAP-202ENST00000360478 5426 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 ALDH8A1-201ENST00000265605 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 PGAP2-235ENST00000532523 1696 ntTSL 5 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 YAF2-219ENST00000555248 5095 ntTSL 2 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 LINC00473-204ENST00000584179 1717 ntTSL 5 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 TNKS-213ENST00000522110 2900 ntBASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC10.98□□□□□ -0.65
NPIPA3F8WFD2 CEP57L1-204ENST00000407272 1947 ntTSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 OAS1-203ENST00000452357 1990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 INVS-202ENST00000262457 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 MYBPC3-201ENST00000256993 4217 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 MYBPC3-202ENST00000399249 4217 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 STX16-205ENST00000361830 4318 ntTSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 ABHD17B-201ENST00000333421 2614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 CASS4-201ENST00000360314 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AC012377.1-201ENST00000499797 2730 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 TYRO3P-201ENST00000558165 2705 ntBASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 USP53-201ENST00000274030 5936 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 MON2-212ENST00000552115 3760 ntTSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 FTL-201ENST00000331825 878 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 KRTAP19-4-201ENST00000334058 310 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 CFAP58-201ENST00000369703 466 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 IGLV3-22-201ENST00000390307 409 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AC092587.1-201ENST00000410042 669 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AGAP13P-201ENST00000417888 363 ntBASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 SLC16A14P1-201ENST00000506846 1117 ntBASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 IGHV7-56-201ENST00000518372 351 ntBASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 DHDDS-216ENST00000525682 1235 ntTSL 2 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 ELOBP2-201ENST00000526184 355 ntBASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 STAMBP-211ENST00000536064 845 ntTSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 RPLP0-205ENST00000546989 993 ntTSL 5 BASIC10.97□□□□□ -0.65
NPIPA3F8WFD2 AC007540.1-201ENST00000548473 507 ntTSL 3 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 380.7 ms