Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC142381.3-201ENST00000568208 1670 ntBASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 AC079630.1-202ENST00000618127 1840 ntBASIC24.58■■□□□ 1.53
PTCH2Q9Y6C5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCH2Q9Y6C5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PTCH2Q9Y6C5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCH2Q9Y6C5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCH2Q9Y6C5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.57■■□□□ 1.52
PTCH2Q9Y6C5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PTCH2Q9Y6C5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.57■■□□□ 1.52
PTCH2Q9Y6C5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.57■■□□□ 1.52
PTCH2Q9Y6C5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCH2Q9Y6C5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCH2Q9Y6C5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PTCH2Q9Y6C5 AP003733.4-201ENST00000623785 1697 ntBASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
PTCH2Q9Y6C5 AC055733.4-201ENST00000638462 1354 ntBASIC24.55■■□□□ 1.52
PTCH2Q9Y6C5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
PTCH2Q9Y6C5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
PTCH2Q9Y6C5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC24.55■■□□□ 1.52
PTCH2Q9Y6C5 AC097658.1-201ENST00000475555 843 ntBASIC24.55■■□□□ 1.52
PTCH2Q9Y6C5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.55■■□□□ 1.52
PTCH2Q9Y6C5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.55■■□□□ 1.52
PTCH2Q9Y6C5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.55■■□□□ 1.52
PTCH2Q9Y6C5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.55■■□□□ 1.52
PTCH2Q9Y6C5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 USP36-216ENST00000589424 970 ntTSL 5 BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PTCH2Q9Y6C5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 AL512625.2-201ENST00000417533 625 ntBASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 AC007322.4-201ENST00000509611 723 ntBASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 AC008694.1-202ENST00000636953 945 ntBASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PTCH2Q9Y6C5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PTCH2Q9Y6C5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.52■■□□□ 1.52
PTCH2Q9Y6C5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC24.52■■□□□ 1.52
PTCH2Q9Y6C5 AC008550.1-201ENST00000511500 884 ntBASIC24.52■■□□□ 1.52
PTCH2Q9Y6C5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.52■■□□□ 1.52
PTCH2Q9Y6C5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PTCH2Q9Y6C5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.52■■□□□ 1.52
PTCH2Q9Y6C5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.52■■□□□ 1.52
PTCH2Q9Y6C5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PTCH2Q9Y6C5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.52■■□□□ 1.52
PTCH2Q9Y6C5 DUSP8P5-201ENST00000422884 1815 ntBASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
PTCH2Q9Y6C5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PTCH2Q9Y6C5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PTCH2Q9Y6C5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC24.5■■□□□ 1.51
PTCH2Q9Y6C5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.5■■□□□ 1.51
PTCH2Q9Y6C5 MIR1224-201ENST00000408193 85 ntBASIC24.5■■□□□ 1.51
PTCH2Q9Y6C5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
PTCH2Q9Y6C5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC24.5■■□□□ 1.51
PTCH2Q9Y6C5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC24.5■■□□□ 1.51
PTCH2Q9Y6C5 AC069236.1-201ENST00000604339 616 ntBASIC24.5■■□□□ 1.51
PTCH2Q9Y6C5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms