Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 BX005040.4-201ENST00000637145 1518 ntBASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 SMUG1P1-201ENST00000590640 811 ntBASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 RARRES2P11-201ENST00000635158 484 ntBASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PCDHA2Q9Y5H9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.21■■□□□ 1.47
PCDHA2Q9Y5H9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.2■■□□□ 1.47
PCDHA2Q9Y5H9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHA2Q9Y5H9 OXCT2P1-201ENST00000447263 1535 ntBASIC24.2■■□□□ 1.47
PCDHA2Q9Y5H9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHA2Q9Y5H9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHA2Q9Y5H9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDHA2Q9Y5H9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHA2Q9Y5H9 AC079834.2-201ENST00000609776 1949 ntBASIC24.2■■□□□ 1.46
PCDHA2Q9Y5H9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHA2Q9Y5H9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHA2Q9Y5H9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.2■■□□□ 1.46
PCDHA2Q9Y5H9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHA2Q9Y5H9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHA2Q9Y5H9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHA2Q9Y5H9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHA2Q9Y5H9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHA2Q9Y5H9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHA2Q9Y5H9 LINC00526-201ENST00000581067 1875 ntBASIC24.19■■□□□ 1.46
PCDHA2Q9Y5H9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
PCDHA2Q9Y5H9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHA2Q9Y5H9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PCDHA2Q9Y5H9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHA2Q9Y5H9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDHA2Q9Y5H9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDHA2Q9Y5H9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHA2Q9Y5H9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHA2Q9Y5H9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHA2Q9Y5H9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHA2Q9Y5H9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHA2Q9Y5H9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHA2Q9Y5H9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
PCDHA2Q9Y5H9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
PCDHA2Q9Y5H9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHA2Q9Y5H9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHA2Q9Y5H9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHA2Q9Y5H9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHA2Q9Y5H9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHA2Q9Y5H9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHA2Q9Y5H9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHA2Q9Y5H9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.17■■□□□ 1.46
PCDHA2Q9Y5H9 AC090192.1-201ENST00000517740 490 ntBASIC24.17■■□□□ 1.46
PCDHA2Q9Y5H9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHA2Q9Y5H9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHA2Q9Y5H9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHA2Q9Y5H9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHA2Q9Y5H9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHA2Q9Y5H9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHA2Q9Y5H9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHA2Q9Y5H9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
PCDHA2Q9Y5H9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHA2Q9Y5H9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
PCDHA2Q9Y5H9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHA2Q9Y5H9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 AC004911.1-201ENST00000416316 871 ntBASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 KRT18P61-201ENST00000585825 1298 ntBASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHA2Q9Y5H9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHA2Q9Y5H9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHA2Q9Y5H9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms