Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.7■□□□□ 0.42
LSM5Q9Y4Y9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM5Q9Y4Y9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LSM5Q9Y4Y9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM5Q9Y4Y9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LSM5Q9Y4Y9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LSM5Q9Y4Y9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM5Q9Y4Y9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM5Q9Y4Y9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM5Q9Y4Y9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.69■□□□□ 0.42
LSM5Q9Y4Y9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LSM5Q9Y4Y9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM5Q9Y4Y9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSM5Q9Y4Y9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM5Q9Y4Y9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.68■□□□□ 0.42
LSM5Q9Y4Y9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSM5Q9Y4Y9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSM5Q9Y4Y9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSM5Q9Y4Y9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM5Q9Y4Y9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.68■□□□□ 0.42
LSM5Q9Y4Y9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM5Q9Y4Y9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LSM5Q9Y4Y9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.68■□□□□ 0.42
LSM5Q9Y4Y9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 LINC01529-204ENST00000636474 1715 ntBASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 AF131216.4-201ENST00000638924 1588 ntBASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSM5Q9Y4Y9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 RNF165-205ENST00000588679 2904 ntBASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM5Q9Y4Y9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 AC022616.5-201ENST00000518796 181 ntBASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 LINC01006-201ENST00000333319 2292 ntBASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM5Q9Y4Y9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM5Q9Y4Y9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms