Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 AC006455.2-201ENST00000429931 906 ntBASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 AC026471.6-201ENST00000622954 1905 ntBASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAF6Q9Y4K3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF6Q9Y4K3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF6Q9Y4K3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF6Q9Y4K3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF6Q9Y4K3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRAF6Q9Y4K3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAF6Q9Y4K3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF6Q9Y4K3 OR7E47P-201ENST00000546390 1422 ntBASIC20.92■□□□□ 0.94
TRAF6Q9Y4K3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TRAF6Q9Y4K3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF6Q9Y4K3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAF6Q9Y4K3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 FEM1AP4-201ENST00000443167 1987 ntBASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF6Q9Y4K3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 AC099791.2-201ENST00000605725 427 ntBASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAF6Q9Y4K3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRAF6Q9Y4K3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
TRAF6Q9Y4K3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.89■□□□□ 0.93
TRAF6Q9Y4K3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.89■□□□□ 0.93
TRAF6Q9Y4K3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.89■□□□□ 0.93
TRAF6Q9Y4K3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF6Q9Y4K3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF6Q9Y4K3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
TRAF6Q9Y4K3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
TRAF6Q9Y4K3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAF6Q9Y4K3 AF106564.1-201ENST00000607058 2553 ntBASIC20.89■□□□□ 0.93
TRAF6Q9Y4K3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 KRT16P3-201ENST00000439127 1283 ntBASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRAF6Q9Y4K3 AC068587.7-201ENST00000641602 218 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms