Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CcsQ9WU84 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CcsQ9WU84 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CcsQ9WU84 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.73□□□□□ -0.05
CcsQ9WU84 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CcsQ9WU84 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CcsQ9WU84 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CcsQ9WU84 Gm22238-201ENSMUST00000175222 88 ntBASIC14.73□□□□□ -0.05
CcsQ9WU84 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CcsQ9WU84 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CcsQ9WU84 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CcsQ9WU84 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CcsQ9WU84 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CcsQ9WU84 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CcsQ9WU84 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CcsQ9WU84 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CcsQ9WU84 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CcsQ9WU84 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CcsQ9WU84 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CcsQ9WU84 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.72□□□□□ -0.05
CcsQ9WU84 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CcsQ9WU84 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CcsQ9WU84 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CcsQ9WU84 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CcsQ9WU84 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CcsQ9WU84 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CcsQ9WU84 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CcsQ9WU84 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CcsQ9WU84 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.71□□□□□ -0.05
CcsQ9WU84 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CcsQ9WU84 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CcsQ9WU84 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CcsQ9WU84 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CcsQ9WU84 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.71□□□□□ -0.05
CcsQ9WU84 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CcsQ9WU84 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.71□□□□□ -0.05
CcsQ9WU84 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CcsQ9WU84 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CcsQ9WU84 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CcsQ9WU84 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CcsQ9WU84 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CcsQ9WU84 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CcsQ9WU84 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CcsQ9WU84 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
CcsQ9WU84 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CcsQ9WU84 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CcsQ9WU84 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CcsQ9WU84 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CcsQ9WU84 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.7□□□□□ -0.06
CcsQ9WU84 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CcsQ9WU84 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CcsQ9WU84 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.7□□□□□ -0.06
CcsQ9WU84 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CcsQ9WU84 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CcsQ9WU84 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CcsQ9WU84 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.7□□□□□ -0.06
CcsQ9WU84 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CcsQ9WU84 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.7□□□□□ -0.06
CcsQ9WU84 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CcsQ9WU84 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.69□□□□□ -0.06
CcsQ9WU84 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CcsQ9WU84 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CcsQ9WU84 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CcsQ9WU84 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CcsQ9WU84 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CcsQ9WU84 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CcsQ9WU84 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CcsQ9WU84 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CcsQ9WU84 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CcsQ9WU84 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CcsQ9WU84 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CcsQ9WU84 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CcsQ9WU84 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CcsQ9WU84 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.68□□□□□ -0.06
CcsQ9WU84 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CcsQ9WU84 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CcsQ9WU84 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CcsQ9WU84 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CcsQ9WU84 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CcsQ9WU84 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CcsQ9WU84 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CcsQ9WU84 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CcsQ9WU84 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CcsQ9WU84 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CcsQ9WU84 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CcsQ9WU84 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CcsQ9WU84 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CcsQ9WU84 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CcsQ9WU84 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CcsQ9WU84 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.67□□□□□ -0.06
CcsQ9WU84 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CcsQ9WU84 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CcsQ9WU84 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CcsQ9WU84 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CcsQ9WU84 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CcsQ9WU84 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CcsQ9WU84 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CcsQ9WU84 Fst-202ENSMUST00000223640 2612 ntBASIC14.67□□□□□ -0.06
CcsQ9WU84 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CcsQ9WU84 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms