Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSFQ9UBX1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CTSFQ9UBX1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSFQ9UBX1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.3■□□□□ 0.84
CTSFQ9UBX1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.29■□□□□ 0.84
CTSFQ9UBX1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.29■□□□□ 0.84
CTSFQ9UBX1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSFQ9UBX1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CTSFQ9UBX1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSFQ9UBX1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.29■□□□□ 0.84
CTSFQ9UBX1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CTSFQ9UBX1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.29■□□□□ 0.84
CTSFQ9UBX1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.29■□□□□ 0.84
CTSFQ9UBX1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSFQ9UBX1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.29■□□□□ 0.84
CTSFQ9UBX1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.29■□□□□ 0.84
CTSFQ9UBX1 AP004607.7-201ENST00000527152 1677 ntBASIC20.29■□□□□ 0.84
CTSFQ9UBX1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CTSFQ9UBX1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSFQ9UBX1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.28■□□□□ 0.84
CTSFQ9UBX1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSFQ9UBX1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.28■□□□□ 0.84
CTSFQ9UBX1 AC004911.1-201ENST00000416316 871 ntBASIC20.28■□□□□ 0.84
CTSFQ9UBX1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.28■□□□□ 0.84
CTSFQ9UBX1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.28■□□□□ 0.84
CTSFQ9UBX1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.28■□□□□ 0.84
CTSFQ9UBX1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.28■□□□□ 0.84
CTSFQ9UBX1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CTSFQ9UBX1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.28■□□□□ 0.84
CTSFQ9UBX1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSFQ9UBX1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSFQ9UBX1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.27■□□□□ 0.84
CTSFQ9UBX1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSFQ9UBX1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSFQ9UBX1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.27■□□□□ 0.84
CTSFQ9UBX1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.27■□□□□ 0.84
CTSFQ9UBX1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
CTSFQ9UBX1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.27■□□□□ 0.84
CTSFQ9UBX1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.27■□□□□ 0.84
CTSFQ9UBX1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.27■□□□□ 0.83
CTSFQ9UBX1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTSFQ9UBX1 C1orf229-201ENST00000623686 2258 ntBASIC20.27■□□□□ 0.83
CTSFQ9UBX1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.27■□□□□ 0.83
CTSFQ9UBX1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.26■□□□□ 0.83
CTSFQ9UBX1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.26■□□□□ 0.83
CTSFQ9UBX1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSFQ9UBX1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTSFQ9UBX1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.26■□□□□ 0.83
CTSFQ9UBX1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CTSFQ9UBX1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSFQ9UBX1 AC133561.1-201ENST00000568600 2415 ntBASIC20.26■□□□□ 0.83
CTSFQ9UBX1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSFQ9UBX1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CTSFQ9UBX1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTSFQ9UBX1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 AC055733.4-201ENST00000638462 1354 ntBASIC20.24■□□□□ 0.83
CTSFQ9UBX1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 AC137761.2-201ENST00000561729 223 ntBASIC20.24■□□□□ 0.83
CTSFQ9UBX1 AC145350.3-201ENST00000569033 163 ntBASIC20.24■□□□□ 0.83
CTSFQ9UBX1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 CLDN5-201ENST00000403084 2357 ntBASIC20.24■□□□□ 0.83
CTSFQ9UBX1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTSFQ9UBX1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 AC139530.1-201ENST00000575312 1977 ntBASIC20.23■□□□□ 0.83
CTSFQ9UBX1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.23■□□□□ 0.83
CTSFQ9UBX1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms