Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.79■□□□□ 0.92
TUBB1Q9H4B7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TUBB1Q9H4B7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TUBB1Q9H4B7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.79■□□□□ 0.92
TUBB1Q9H4B7 FEM1AP4-201ENST00000443167 1987 ntBASIC20.79■□□□□ 0.92
TUBB1Q9H4B7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TUBB1Q9H4B7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 AL512631.2-201ENST00000604634 923 ntBASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TUBB1Q9H4B7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.77■□□□□ 0.92
TUBB1Q9H4B7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.77■□□□□ 0.92
TUBB1Q9H4B7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TUBB1Q9H4B7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TUBB1Q9H4B7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.77■□□□□ 0.92
TUBB1Q9H4B7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TUBB1Q9H4B7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.77■□□□□ 0.92
TUBB1Q9H4B7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.77■□□□□ 0.92
TUBB1Q9H4B7 AC010525.1-201ENST00000585559 441 ntBASIC20.77■□□□□ 0.92
TUBB1Q9H4B7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
TUBB1Q9H4B7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TUBB1Q9H4B7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.91
TUBB1Q9H4B7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TUBB1Q9H4B7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.75■□□□□ 0.91
TUBB1Q9H4B7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TUBB1Q9H4B7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TUBB1Q9H4B7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TUBB1Q9H4B7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.75■□□□□ 0.91
TUBB1Q9H4B7 AC068587.7-201ENST00000641602 218 ntBASIC20.75■□□□□ 0.91
TUBB1Q9H4B7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TUBB1Q9H4B7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TUBB1Q9H4B7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TUBB1Q9H4B7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TUBB1Q9H4B7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.74■□□□□ 0.91
TUBB1Q9H4B7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TUBB1Q9H4B7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TUBB1Q9H4B7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TUBB1Q9H4B7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TUBB1Q9H4B7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.74■□□□□ 0.91
TUBB1Q9H4B7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TUBB1Q9H4B7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TUBB1Q9H4B7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TUBB1Q9H4B7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TUBB1Q9H4B7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 SRD5A1P1-201ENST00000442297 786 ntBASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TUBB1Q9H4B7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TUBB1Q9H4B7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TUBB1Q9H4B7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.72■□□□□ 0.91
TUBB1Q9H4B7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.72■□□□□ 0.91
TUBB1Q9H4B7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.72■□□□□ 0.91
TUBB1Q9H4B7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TUBB1Q9H4B7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TUBB1Q9H4B7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBB1Q9H4B7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.72■□□□□ 0.91
TUBB1Q9H4B7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBB1Q9H4B7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBB1Q9H4B7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.71■□□□□ 0.91
TUBB1Q9H4B7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.71■□□□□ 0.91
TUBB1Q9H4B7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TUBB1Q9H4B7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TUBB1Q9H4B7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TUBB1Q9H4B7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms