Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
DDX47Q9H0S4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.42■■□□□ 1.18
DDX47Q9H0S4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.42■■□□□ 1.18
DDX47Q9H0S4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
DDX47Q9H0S4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.42■■□□□ 1.18
DDX47Q9H0S4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
DDX47Q9H0S4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
DDX47Q9H0S4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
DDX47Q9H0S4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
DDX47Q9H0S4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX47Q9H0S4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DDX47Q9H0S4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX47Q9H0S4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX47Q9H0S4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DDX47Q9H0S4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
DDX47Q9H0S4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DDX47Q9H0S4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.41■■□□□ 1.18
DDX47Q9H0S4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DDX47Q9H0S4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX47Q9H0S4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DDX47Q9H0S4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.4■■□□□ 1.18
DDX47Q9H0S4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX47Q9H0S4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.4■■□□□ 1.18
DDX47Q9H0S4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX47Q9H0S4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DDX47Q9H0S4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.4■■□□□ 1.18
DDX47Q9H0S4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX47Q9H0S4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX47Q9H0S4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.4■■□□□ 1.18
DDX47Q9H0S4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DDX47Q9H0S4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
DDX47Q9H0S4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
DDX47Q9H0S4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
DDX47Q9H0S4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
DDX47Q9H0S4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
DDX47Q9H0S4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.39■■□□□ 1.18
DDX47Q9H0S4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.39■■□□□ 1.17
DDX47Q9H0S4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX47Q9H0S4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX47Q9H0S4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX47Q9H0S4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX47Q9H0S4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
DDX47Q9H0S4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
DDX47Q9H0S4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DDX47Q9H0S4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DDX47Q9H0S4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
DDX47Q9H0S4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DDX47Q9H0S4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX47Q9H0S4 KRT125P-201ENST00000546827 989 ntBASIC22.37■■□□□ 1.17
DDX47Q9H0S4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.37■■□□□ 1.17
DDX47Q9H0S4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DDX47Q9H0S4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DDX47Q9H0S4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DDX47Q9H0S4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX47Q9H0S4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX47Q9H0S4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.36■■□□□ 1.17
DDX47Q9H0S4 AL031602.1-201ENST00000633169 911 ntBASIC22.36■■□□□ 1.17
DDX47Q9H0S4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX47Q9H0S4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX47Q9H0S4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX47Q9H0S4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DDX47Q9H0S4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 AC079089.2-201ENST00000531211 1277 ntBASIC22.35■■□□□ 1.17
DDX47Q9H0S4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 AC010997.5-201ENST00000609182 354 ntBASIC22.35■■□□□ 1.17
DDX47Q9H0S4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.35■■□□□ 1.17
DDX47Q9H0S4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX47Q9H0S4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.34■■□□□ 1.17
DDX47Q9H0S4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX47Q9H0S4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX47Q9H0S4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX47Q9H0S4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX47Q9H0S4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.34■■□□□ 1.17
DDX47Q9H0S4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX47Q9H0S4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms