Protein–RNA interactions for Protein: Q9C026

TRIM9, E3 ubiquitin-protein ligase TRIM9, humanhuman

Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9Q9C026 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24■■□□□ 1.43
TRIM9Q9C026 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC24■■□□□ 1.43
TRIM9Q9C026 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24■■□□□ 1.43
TRIM9Q9C026 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24■■□□□ 1.43
TRIM9Q9C026 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24■■□□□ 1.43
TRIM9Q9C026 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM9Q9C026 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM9Q9C026 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM9Q9C026 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24■■□□□ 1.43
TRIM9Q9C026 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24■■□□□ 1.43
TRIM9Q9C026 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM9Q9C026 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM9Q9C026 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM9Q9C026 EDA-201ENST00000338901 1233 ntBASIC23.99■■□□□ 1.43
TRIM9Q9C026 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM9Q9C026 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM9Q9C026 AP001330.3-201ENST00000520123 633 ntBASIC23.99■■□□□ 1.43
TRIM9Q9C026 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM9Q9C026 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.99■■□□□ 1.43
TRIM9Q9C026 AC008764.7-201ENST00000593779 1081 ntBASIC23.99■■□□□ 1.43
TRIM9Q9C026 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.99■■□□□ 1.43
TRIM9Q9C026 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.99■■□□□ 1.43
TRIM9Q9C026 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM9Q9C026 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM9Q9C026 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.98■■□□□ 1.43
TRIM9Q9C026 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM9Q9C026 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.98■■□□□ 1.43
TRIM9Q9C026 AC126544.1-201ENST00000580842 1059 ntBASIC23.98■■□□□ 1.43
TRIM9Q9C026 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.98■■□□□ 1.43
TRIM9Q9C026 AL031432.3-201ENST00000607698 485 ntBASIC23.98■■□□□ 1.43
TRIM9Q9C026 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM9Q9C026 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM9Q9C026 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM9Q9C026 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM9Q9C026 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM9Q9C026 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
TRIM9Q9C026 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM9Q9C026 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM9Q9C026 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM9Q9C026 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM9Q9C026 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM9Q9C026 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
TRIM9Q9C026 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM9Q9C026 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM9Q9C026 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM9Q9C026 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM9Q9C026 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM9Q9C026 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM9Q9C026 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.97■■□□□ 1.43
TRIM9Q9C026 AC099791.1-201ENST00000416440 715 ntBASIC23.97■■□□□ 1.43
TRIM9Q9C026 IGHV3-19-201ENST00000521488 291 ntBASIC23.97■■□□□ 1.43
TRIM9Q9C026 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
TRIM9Q9C026 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.97■■□□□ 1.43
TRIM9Q9C026 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.97■■□□□ 1.43
TRIM9Q9C026 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.97■■□□□ 1.43
TRIM9Q9C026 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM9Q9C026 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM9Q9C026 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM9Q9C026 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM9Q9C026 AC027682.1-201ENST00000562846 899 ntBASIC23.96■■□□□ 1.43
TRIM9Q9C026 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.96■■□□□ 1.43
TRIM9Q9C026 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM9Q9C026 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
TRIM9Q9C026 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.43
TRIM9Q9C026 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TRIM9Q9C026 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM9Q9C026 AL355001.2-201ENST00000620617 1191 ntBASIC23.95■■□□□ 1.42
TRIM9Q9C026 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
TRIM9Q9C026 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM9Q9C026 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM9Q9C026 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM9Q9C026 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.95■■□□□ 1.42
TRIM9Q9C026 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM9Q9C026 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.94■■□□□ 1.42
TRIM9Q9C026 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM9Q9C026 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM9Q9C026 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.94■■□□□ 1.42
TRIM9Q9C026 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.94■■□□□ 1.42
TRIM9Q9C026 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM9Q9C026 MIR939-201ENST00000401314 82 ntBASIC23.94■■□□□ 1.42
TRIM9Q9C026 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM9Q9C026 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM9Q9C026 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM9Q9C026 SMUG1P1-201ENST00000590640 811 ntBASIC23.94■■□□□ 1.42
TRIM9Q9C026 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
TRIM9Q9C026 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM9Q9C026 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM9Q9C026 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.94■■□□□ 1.42
TRIM9Q9C026 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.94■■□□□ 1.42
TRIM9Q9C026 AC007375.3-201ENST00000600936 2314 ntBASIC23.94■■□□□ 1.42
TRIM9Q9C026 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM9Q9C026 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
TRIM9Q9C026 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.93■■□□□ 1.42
TRIM9Q9C026 AF213884.3-201ENST00000563833 479 ntBASIC23.93■■□□□ 1.42
TRIM9Q9C026 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM9Q9C026 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
TRIM9Q9C026 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
TRIM9Q9C026 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.93■■□□□ 1.42
TRIM9Q9C026 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM9Q9C026 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms