Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPENQ96T58 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
SPENQ96T58 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPENQ96T58 AC087239.1-201ENST00000622671 572 ntBASIC19.61■□□□□ 0.73
SPENQ96T58 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.61■□□□□ 0.73
SPENQ96T58 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPENQ96T58 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.61■□□□□ 0.73
SPENQ96T58 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPENQ96T58 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPENQ96T58 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.61■□□□□ 0.73
SPENQ96T58 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.61■□□□□ 0.73
SPENQ96T58 AC105036.2-201ENST00000569468 176 ntBASIC19.61■□□□□ 0.73
SPENQ96T58 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPENQ96T58 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.61■□□□□ 0.73
SPENQ96T58 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPENQ96T58 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.61■□□□□ 0.73
SPENQ96T58 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SPENQ96T58 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SPENQ96T58 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPENQ96T58 AF201337.1-201ENST00000520239 748 ntBASIC19.61■□□□□ 0.73
SPENQ96T58 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.61■□□□□ 0.73
SPENQ96T58 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPENQ96T58 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.6■□□□□ 0.73
SPENQ96T58 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.6■□□□□ 0.73
SPENQ96T58 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPENQ96T58 AC092118.2-201ENST00000613495 667 ntBASIC19.6■□□□□ 0.73
SPENQ96T58 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPENQ96T58 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPENQ96T58 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPENQ96T58 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPENQ96T58 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPENQ96T58 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SPENQ96T58 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPENQ96T58 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPENQ96T58 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
SPENQ96T58 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.6■□□□□ 0.73
SPENQ96T58 AC007322.1-201ENST00000426983 750 ntBASIC19.6■□□□□ 0.73
SPENQ96T58 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPENQ96T58 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPENQ96T58 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SPENQ96T58 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SPENQ96T58 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SPENQ96T58 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.59■□□□□ 0.73
SPENQ96T58 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.59■□□□□ 0.73
SPENQ96T58 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPENQ96T58 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.59■□□□□ 0.73
SPENQ96T58 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.59■□□□□ 0.73
SPENQ96T58 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPENQ96T58 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SPENQ96T58 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPENQ96T58 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.58■□□□□ 0.73
SPENQ96T58 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.58■□□□□ 0.73
SPENQ96T58 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.58■□□□□ 0.73
SPENQ96T58 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.58■□□□□ 0.73
SPENQ96T58 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.58■□□□□ 0.73
SPENQ96T58 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.58■□□□□ 0.72
SPENQ96T58 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.58■□□□□ 0.72
SPENQ96T58 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.72
SPENQ96T58 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.58■□□□□ 0.72
SPENQ96T58 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SPENQ96T58 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.57■□□□□ 0.72
SPENQ96T58 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.57■□□□□ 0.72
SPENQ96T58 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SPENQ96T58 RARRES2P4-201ENST00000514074 484 ntBASIC19.57■□□□□ 0.72
SPENQ96T58 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.57■□□□□ 0.72
SPENQ96T58 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SPENQ96T58 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPENQ96T58 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.57■□□□□ 0.72
SPENQ96T58 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.57■□□□□ 0.72
SPENQ96T58 AC133552.2-202ENST00000575694 574 ntBASIC19.57■□□□□ 0.72
SPENQ96T58 MYCNOS-205ENST00000641950 531 ntBASIC19.57■□□□□ 0.72
SPENQ96T58 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPENQ96T58 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.56■□□□□ 0.72
SPENQ96T58 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPENQ96T58 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
SPENQ96T58 OXCT2P1-201ENST00000447263 1535 ntBASIC19.56■□□□□ 0.72
SPENQ96T58 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPENQ96T58 AC055733.4-201ENST00000638462 1354 ntBASIC19.55■□□□□ 0.72
SPENQ96T58 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPENQ96T58 MKRN4P-201ENST00000444706 1521 ntBASIC19.55■□□□□ 0.72
SPENQ96T58 AL139125.2-201ENST00000623134 1869 ntBASIC19.55■□□□□ 0.72
SPENQ96T58 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPENQ96T58 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.55■□□□□ 0.72
SPENQ96T58 AC142381.3-201ENST00000568208 1670 ntBASIC19.55■□□□□ 0.72
SPENQ96T58 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPENQ96T58 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.55■□□□□ 0.72
SPENQ96T58 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.55■□□□□ 0.72
SPENQ96T58 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SPENQ96T58 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.55■□□□□ 0.72
SPENQ96T58 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPENQ96T58 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.55■□□□□ 0.72
SPENQ96T58 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SPENQ96T58 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPENQ96T58 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SPENQ96T58 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPENQ96T58 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPENQ96T58 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPENQ96T58 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPENQ96T58 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPENQ96T58 AC093787.1-201ENST00000450396 207 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms