Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.49■□□□□ 0.55
CSMD1Q96PZ7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.49■□□□□ 0.55
CSMD1Q96PZ7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.49■□□□□ 0.55
CSMD1Q96PZ7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSMD1Q96PZ7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSMD1Q96PZ7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSMD1Q96PZ7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CSMD1Q96PZ7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSMD1Q96PZ7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSMD1Q96PZ7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.49■□□□□ 0.55
CSMD1Q96PZ7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CSMD1Q96PZ7 CYP2T1P-201ENST00000432607 1285 ntBASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 DUSP8P5-201ENST00000422884 1815 ntBASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 MIR6089-201ENST00000616698 64 ntBASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 AC144652.1-201ENST00000609974 1624 ntBASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSMD1Q96PZ7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 SNORA78-201ENST00000459373 127 ntBASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 AC004687.1-201ENST00000579003 1625 ntBASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.47■□□□□ 0.55
CSMD1Q96PZ7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.46■□□□□ 0.55
CSMD1Q96PZ7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 AC068338.2-201ENST00000563278 1430 ntBASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 MIR718-201ENST00000390190 70 ntBASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 AC007322.4-201ENST00000509611 723 ntBASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 Z99916.2-201ENST00000604037 246 ntBASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CSMD1Q96PZ7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 UBE2SP1-201ENST00000450587 669 ntBASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 AC091874.3-201ENST00000512672 1195 ntBASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 AC138932.3-201ENST00000567634 1902 ntBASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.44■□□□□ 0.54
CSMD1Q96PZ7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
CSMD1Q96PZ7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms