Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.71■□□□□ 0.27
DUX3Q96PT4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.71■□□□□ 0.27
DUX3Q96PT4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.71■□□□□ 0.27
DUX3Q96PT4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.71■□□□□ 0.27
DUX3Q96PT4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
DUX3Q96PT4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DUX3Q96PT4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.71■□□□□ 0.27
DUX3Q96PT4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.71■□□□□ 0.27
DUX3Q96PT4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DUX3Q96PT4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
DUX3Q96PT4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.7■□□□□ 0.26
DUX3Q96PT4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 KRT18P61-201ENST00000585825 1298 ntBASIC16.7■□□□□ 0.26
DUX3Q96PT4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.7■□□□□ 0.26
DUX3Q96PT4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DUX3Q96PT4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DUX3Q96PT4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
DUX3Q96PT4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.69■□□□□ 0.26
DUX3Q96PT4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.69■□□□□ 0.26
DUX3Q96PT4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.69■□□□□ 0.26
DUX3Q96PT4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.69■□□□□ 0.26
DUX3Q96PT4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.69■□□□□ 0.26
DUX3Q96PT4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUX3Q96PT4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
DUX3Q96PT4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
DUX3Q96PT4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUX3Q96PT4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DUX3Q96PT4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.69■□□□□ 0.26
DUX3Q96PT4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DUX3Q96PT4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.68■□□□□ 0.26
DUX3Q96PT4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUX3Q96PT4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUX3Q96PT4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUX3Q96PT4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
DUX3Q96PT4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUX3Q96PT4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
DUX3Q96PT4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.68■□□□□ 0.26
DUX3Q96PT4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.68■□□□□ 0.26
DUX3Q96PT4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.68■□□□□ 0.26
DUX3Q96PT4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.68■□□□□ 0.26
DUX3Q96PT4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
DUX3Q96PT4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
DUX3Q96PT4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUX3Q96PT4 AC004854.2-201ENST00000608450 1441 ntBASIC16.68■□□□□ 0.26
DUX3Q96PT4 C9orf163-202ENST00000624034 2573 ntBASIC16.68■□□□□ 0.26
DUX3Q96PT4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
DUX3Q96PT4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DUX3Q96PT4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DUX3Q96PT4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUX3Q96PT4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
DUX3Q96PT4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUX3Q96PT4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DUX3Q96PT4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.67■□□□□ 0.26
DUX3Q96PT4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.67■□□□□ 0.26
DUX3Q96PT4 AC090192.1-201ENST00000517740 490 ntBASIC16.67■□□□□ 0.26
DUX3Q96PT4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DUX3Q96PT4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.67■□□□□ 0.26
DUX3Q96PT4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
DUX3Q96PT4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUX3Q96PT4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUX3Q96PT4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DUX3Q96PT4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUX3Q96PT4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUX3Q96PT4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DUX3Q96PT4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DUX3Q96PT4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DUX3Q96PT4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.66■□□□□ 0.26
DUX3Q96PT4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DUX3Q96PT4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms