Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIPA1Q96FS4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SIPA1Q96FS4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.65■■□□□ 1.06
SIPA1Q96FS4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SIPA1Q96FS4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
SIPA1Q96FS4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SIPA1Q96FS4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.64■■□□□ 1.05
SIPA1Q96FS4 NCF1B-203ENST00000435988 1254 ntBASIC21.64■■□□□ 1.05
SIPA1Q96FS4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.64■■□□□ 1.05
SIPA1Q96FS4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.64■■□□□ 1.05
SIPA1Q96FS4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.64■■□□□ 1.05
SIPA1Q96FS4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.64■■□□□ 1.05
SIPA1Q96FS4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
SIPA1Q96FS4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SIPA1Q96FS4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SIPA1Q96FS4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.64■■□□□ 1.05
SIPA1Q96FS4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SIPA1Q96FS4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SIPA1Q96FS4 OR7E47P-201ENST00000546390 1422 ntBASIC21.63■■□□□ 1.05
SIPA1Q96FS4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 UBE2DNL-204ENST00000602536 740 ntBASIC21.63■■□□□ 1.05
SIPA1Q96FS4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SIPA1Q96FS4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.62■■□□□ 1.05
SIPA1Q96FS4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SIPA1Q96FS4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.62■■□□□ 1.05
SIPA1Q96FS4 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.62■■□□□ 1.05
SIPA1Q96FS4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SIPA1Q96FS4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.62■■□□□ 1.05
SIPA1Q96FS4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.62■■□□□ 1.05
SIPA1Q96FS4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SIPA1Q96FS4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.62■■□□□ 1.05
SIPA1Q96FS4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIPA1Q96FS4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIPA1Q96FS4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIPA1Q96FS4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIPA1Q96FS4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SIPA1Q96FS4 AL355802.2-201ENST00000402069 882 ntBASIC21.61■■□□□ 1.05
SIPA1Q96FS4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.61■■□□□ 1.05
SIPA1Q96FS4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.61■■□□□ 1.05
SIPA1Q96FS4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.61■■□□□ 1.05
SIPA1Q96FS4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIPA1Q96FS4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.61■■□□□ 1.05
SIPA1Q96FS4 AC231657.2-201ENST00000624556 255 ntBASIC21.61■■□□□ 1.05
SIPA1Q96FS4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIPA1Q96FS4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIPA1Q96FS4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 GPX1P1-201ENST00000388829 606 ntBASIC21.6■■□□□ 1.05
SIPA1Q96FS4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.6■■□□□ 1.05
SIPA1Q96FS4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SIPA1Q96FS4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.59■■□□□ 1.05
SIPA1Q96FS4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SIPA1Q96FS4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIPA1Q96FS4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SIPA1Q96FS4 AL034346.1-201ENST00000568244 1277 ntBASIC21.59■■□□□ 1.05
SIPA1Q96FS4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIPA1Q96FS4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.59■■□□□ 1.05
SIPA1Q96FS4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.59■■□□□ 1.05
SIPA1Q96FS4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
SIPA1Q96FS4 MYCNOS-205ENST00000641950 531 ntBASIC21.59■■□□□ 1.05
SIPA1Q96FS4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIPA1Q96FS4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.59■■□□□ 1.05
SIPA1Q96FS4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIPA1Q96FS4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.58■■□□□ 1.05
SIPA1Q96FS4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIPA1Q96FS4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIPA1Q96FS4 AC007322.1-201ENST00000426983 750 ntBASIC21.58■■□□□ 1.05
SIPA1Q96FS4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.58■■□□□ 1.05
SIPA1Q96FS4 DUX4L16-201ENST00000555130 1264 ntBASIC21.58■■□□□ 1.05
SIPA1Q96FS4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SIPA1Q96FS4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.58■■□□□ 1.05
SIPA1Q96FS4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SIPA1Q96FS4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SIPA1Q96FS4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.58■■□□□ 1.04
SIPA1Q96FS4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SIPA1Q96FS4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.58■■□□□ 1.04
SIPA1Q96FS4 LINC00526-201ENST00000581067 1875 ntBASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms