Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.07■■□□□ 1.28
SHC3Q92529 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.07■■□□□ 1.28
SHC3Q92529 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHC3Q92529 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHC3Q92529 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SHC3Q92529 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SHC3Q92529 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SHC3Q92529 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SHC3Q92529 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
SHC3Q92529 AC026471.6-201ENST00000622954 1905 ntBASIC23.06■■□□□ 1.28
SHC3Q92529 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
SHC3Q92529 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.06■■□□□ 1.28
SHC3Q92529 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
SHC3Q92529 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SHC3Q92529 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.06■■□□□ 1.28
SHC3Q92529 AC099791.1-201ENST00000416440 715 ntBASIC23.06■■□□□ 1.28
SHC3Q92529 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.06■■□□□ 1.28
SHC3Q92529 AC027682.1-201ENST00000562846 899 ntBASIC23.06■■□□□ 1.28
SHC3Q92529 AC126544.1-201ENST00000580842 1059 ntBASIC23.06■■□□□ 1.28
SHC3Q92529 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.06■■□□□ 1.28
SHC3Q92529 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.06■■□□□ 1.28
SHC3Q92529 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SHC3Q92529 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SHC3Q92529 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
SHC3Q92529 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.05■■□□□ 1.28
SHC3Q92529 CLDN5-201ENST00000403084 2357 ntBASIC23.05■■□□□ 1.28
SHC3Q92529 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHC3Q92529 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHC3Q92529 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHC3Q92529 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.05■■□□□ 1.28
SHC3Q92529 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
SHC3Q92529 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.05■■□□□ 1.28
SHC3Q92529 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SHC3Q92529 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SHC3Q92529 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.05■■□□□ 1.28
SHC3Q92529 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SHC3Q92529 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHC3Q92529 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SHC3Q92529 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SHC3Q92529 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHC3Q92529 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SHC3Q92529 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SHC3Q92529 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.04■■□□□ 1.28
SHC3Q92529 AL355001.2-201ENST00000620617 1191 ntBASIC23.04■■□□□ 1.28
SHC3Q92529 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SHC3Q92529 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
SHC3Q92529 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SHC3Q92529 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHC3Q92529 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHC3Q92529 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHC3Q92529 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.03■■□□□ 1.28
SHC3Q92529 MIR939-201ENST00000401314 82 ntBASIC23.03■■□□□ 1.28
SHC3Q92529 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.03■■□□□ 1.28
SHC3Q92529 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.03■■□□□ 1.28
SHC3Q92529 SMUG1P1-201ENST00000590640 811 ntBASIC23.03■■□□□ 1.28
SHC3Q92529 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.03■■□□□ 1.28
SHC3Q92529 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
SHC3Q92529 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHC3Q92529 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.03■■□□□ 1.28
SHC3Q92529 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHC3Q92529 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SHC3Q92529 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SHC3Q92529 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.02■■□□□ 1.28
SHC3Q92529 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.02■■□□□ 1.28
SHC3Q92529 AF213884.3-201ENST00000563833 479 ntBASIC23.02■■□□□ 1.28
SHC3Q92529 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SHC3Q92529 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.02■■□□□ 1.28
SHC3Q92529 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SHC3Q92529 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.02■■□□□ 1.28
SHC3Q92529 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.02■■□□□ 1.28
SHC3Q92529 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SHC3Q92529 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.01■■□□□ 1.27
SHC3Q92529 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
SHC3Q92529 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
SHC3Q92529 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.01■■□□□ 1.27
SHC3Q92529 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SHC3Q92529 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SHC3Q92529 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SHC3Q92529 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.01■■□□□ 1.27
SHC3Q92529 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.01■■□□□ 1.27
SHC3Q92529 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SHC3Q92529 AL034346.1-201ENST00000568244 1277 ntBASIC23.01■■□□□ 1.27
SHC3Q92529 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
SHC3Q92529 AL139246.5-201ENST00000606645 996 ntBASIC23.01■■□□□ 1.27
SHC3Q92529 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC23.01■■□□□ 1.27
SHC3Q92529 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.01■■□□□ 1.27
SHC3Q92529 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
SHC3Q92529 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHC3Q92529 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHC3Q92529 AP004607.7-201ENST00000527152 1677 ntBASIC23■■□□□ 1.27
SHC3Q92529 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23■■□□□ 1.27
SHC3Q92529 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23■■□□□ 1.27
SHC3Q92529 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
SHC3Q92529 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23■■□□□ 1.27
SHC3Q92529 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHC3Q92529 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SHC3Q92529 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23■■□□□ 1.27
SHC3Q92529 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23■■□□□ 1.27
SHC3Q92529 AL136967.2-201ENST00000623968 743 ntBASIC23■■□□□ 1.27
SHC3Q92529 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms