Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 CA15P2-201ENST00000611168 834 ntBASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCLL1Q8TB92 FAM99A-202ENST00000538190 1989 ntBASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCLL1Q8TB92 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCLL1Q8TB92 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HMGCLL1Q8TB92 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HMGCLL1Q8TB92 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCLL1Q8TB92 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCLL1Q8TB92 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCLL1Q8TB92 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCLL1Q8TB92 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCLL1Q8TB92 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.16■□□□□ 0.98
HMGCLL1Q8TB92 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCLL1Q8TB92 AC126544.1-201ENST00000580842 1059 ntBASIC21.16■□□□□ 0.98
HMGCLL1Q8TB92 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 IGHV3-19-201ENST00000521488 291 ntBASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 AC087239.1-201ENST00000622671 572 ntBASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCLL1Q8TB92 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HMGCLL1Q8TB92 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.98
HMGCLL1Q8TB92 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HMGCLL1Q8TB92 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.14■□□□□ 0.98
HMGCLL1Q8TB92 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
HMGCLL1Q8TB92 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HMGCLL1Q8TB92 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
HMGCLL1Q8TB92 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
HMGCLL1Q8TB92 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HMGCLL1Q8TB92 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGCLL1Q8TB92 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.14■□□□□ 0.97
HMGCLL1Q8TB92 AC010141.3-201ENST00000456659 717 ntBASIC21.14■□□□□ 0.97
HMGCLL1Q8TB92 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.14■□□□□ 0.97
HMGCLL1Q8TB92 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGCLL1Q8TB92 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGCLL1Q8TB92 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGCLL1Q8TB92 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMGCLL1Q8TB92 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.14■□□□□ 0.97
HMGCLL1Q8TB92 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCLL1Q8TB92 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCLL1Q8TB92 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HMGCLL1Q8TB92 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
HMGCLL1Q8TB92 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HMGCLL1Q8TB92 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.13■□□□□ 0.97
HMGCLL1Q8TB92 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.13■□□□□ 0.97
HMGCLL1Q8TB92 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.13■□□□□ 0.97
HMGCLL1Q8TB92 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.13■□□□□ 0.97
HMGCLL1Q8TB92 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.13■□□□□ 0.97
HMGCLL1Q8TB92 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms