Protein–RNA interactions for Protein: Q8IYA8

CCDC36, Interactor of HORMAD1 protein 1, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36Q8IYA8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC36Q8IYA8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 C9orf163-202ENST00000624034 2573 ntBASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 AC233723.2-201ENST00000623798 2106 ntBASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 EP400NL-214ENST00000641289 2402 ntBASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC36Q8IYA8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 CA15P2-201ENST00000611168 834 ntBASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC36Q8IYA8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC36Q8IYA8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC36Q8IYA8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC36Q8IYA8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC36Q8IYA8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC36Q8IYA8 AC010525.1-201ENST00000585559 441 ntBASIC19.15■□□□□ 0.66
CCDC36Q8IYA8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC36Q8IYA8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC36Q8IYA8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC36Q8IYA8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC36Q8IYA8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC36Q8IYA8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC36Q8IYA8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.14■□□□□ 0.66
CCDC36Q8IYA8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC36Q8IYA8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 AC010141.3-201ENST00000456659 717 ntBASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 IGHV3-19-201ENST00000521488 291 ntBASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC36Q8IYA8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 LINC01960-201ENST00000563759 1884 ntBASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 AC127496.7-201ENST00000625110 1798 ntBASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 ESRRAP2-201ENST00000418437 1549 ntBASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC36Q8IYA8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC36Q8IYA8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC36Q8IYA8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC36Q8IYA8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC36Q8IYA8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms