Protein–RNA interactions for Protein: Q717R9

CYS1, Cystin-1, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYS1Q717R9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CYS1Q717R9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.55■■□□□ 1.04
CYS1Q717R9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CYS1Q717R9 AL035685.1-201ENST00000636663 812 ntBASIC21.55■■□□□ 1.04
CYS1Q717R9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYS1Q717R9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.55■■□□□ 1.04
CYS1Q717R9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.55■■□□□ 1.04
CYS1Q717R9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CYS1Q717R9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CYS1Q717R9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.54■■□□□ 1.04
CYS1Q717R9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.54■■□□□ 1.04
CYS1Q717R9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CYS1Q717R9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.54■■□□□ 1.04
CYS1Q717R9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYS1Q717R9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYS1Q717R9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CYS1Q717R9 GUSBP5-201ENST00000418136 578 ntBASIC21.54■■□□□ 1.04
CYS1Q717R9 SRD5A1P1-201ENST00000442297 786 ntBASIC21.54■■□□□ 1.04
CYS1Q717R9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.54■■□□□ 1.04
CYS1Q717R9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CYS1Q717R9 AL138724.1-201ENST00000606771 1088 ntBASIC21.54■■□□□ 1.04
CYS1Q717R9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYS1Q717R9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CYS1Q717R9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.53■■□□□ 1.04
CYS1Q717R9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CYS1Q717R9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CYS1Q717R9 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CYS1Q717R9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.53■■□□□ 1.04
CYS1Q717R9 AL512631.2-201ENST00000604634 923 ntBASIC21.53■■□□□ 1.04
CYS1Q717R9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CYS1Q717R9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CYS1Q717R9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CYS1Q717R9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CYS1Q717R9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.53■■□□□ 1.04
CYS1Q717R9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CYS1Q717R9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYS1Q717R9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.52■■□□□ 1.04
CYS1Q717R9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYS1Q717R9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CYS1Q717R9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYS1Q717R9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.52■■□□□ 1.04
CYS1Q717R9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.52■■□□□ 1.04
CYS1Q717R9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.52■■□□□ 1.04
CYS1Q717R9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYS1Q717R9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYS1Q717R9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYS1Q717R9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CYS1Q717R9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
CYS1Q717R9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CYS1Q717R9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CYS1Q717R9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CYS1Q717R9 AL034346.1-201ENST00000568244 1277 ntBASIC21.51■■□□□ 1.03
CYS1Q717R9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CYS1Q717R9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.51■■□□□ 1.03
CYS1Q717R9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
CYS1Q717R9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.51■■□□□ 1.03
CYS1Q717R9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYS1Q717R9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.5■■□□□ 1.03
CYS1Q717R9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CYS1Q717R9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CYS1Q717R9 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.5■■□□□ 1.03
CYS1Q717R9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.5■■□□□ 1.03
CYS1Q717R9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYS1Q717R9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CYS1Q717R9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CYS1Q717R9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CYS1Q717R9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.49■■□□□ 1.03
CYS1Q717R9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CYS1Q717R9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
CYS1Q717R9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CYS1Q717R9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CYS1Q717R9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CYS1Q717R9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CYS1Q717R9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CYS1Q717R9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CYS1Q717R9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CYS1Q717R9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CYS1Q717R9 AP005435.1-201ENST00000529293 1178 ntBASIC21.48■■□□□ 1.03
CYS1Q717R9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.48■■□□□ 1.03
CYS1Q717R9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.48■■□□□ 1.03
CYS1Q717R9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CYS1Q717R9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CYS1Q717R9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.48■■□□□ 1.03
CYS1Q717R9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CYS1Q717R9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CYS1Q717R9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CYS1Q717R9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CYS1Q717R9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CYS1Q717R9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYS1Q717R9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.47■■□□□ 1.03
CYS1Q717R9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYS1Q717R9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
CYS1Q717R9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.47■■□□□ 1.03
CYS1Q717R9 DUX4L19-201ENST00000557448 1267 ntBASIC21.47■■□□□ 1.03
CYS1Q717R9 AC010525.1-201ENST00000585559 441 ntBASIC21.47■■□□□ 1.03
CYS1Q717R9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.47■■□□□ 1.03
CYS1Q717R9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYS1Q717R9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CYS1Q717R9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CYS1Q717R9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms