Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 AC011551.1-201ENST00000614101 683 ntBASIC20.29■□□□□ 0.84
LPCAT4Q643R3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 AC009831.1-201ENST00000580420 1582 ntBASIC20.29■□□□□ 0.84
LPCAT4Q643R3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LPCAT4Q643R3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT4Q643R3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT4Q643R3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT4Q643R3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
LPCAT4Q643R3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT4Q643R3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LPCAT4Q643R3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT4Q643R3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT4Q643R3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT4Q643R3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT4Q643R3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LPCAT4Q643R3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LPCAT4Q643R3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LPCAT4Q643R3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LPCAT4Q643R3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LPCAT4Q643R3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.27■□□□□ 0.84
LPCAT4Q643R3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LPCAT4Q643R3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LPCAT4Q643R3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LPCAT4Q643R3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT4Q643R3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT4Q643R3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT4Q643R3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT4Q643R3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT4Q643R3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT4Q643R3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LPCAT4Q643R3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT4Q643R3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.26■□□□□ 0.83
LPCAT4Q643R3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LPCAT4Q643R3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LPCAT4Q643R3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 AC133552.2-201ENST00000619106 1032 ntBASIC20.25■□□□□ 0.83
LPCAT4Q643R3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LPCAT4Q643R3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.24■□□□□ 0.83
LPCAT4Q643R3 AC087289.5-201ENST00000586076 3175 ntBASIC20.24■□□□□ 0.83
LPCAT4Q643R3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 MIR639-201ENST00000384974 98 ntBASIC20.23■□□□□ 0.83
LPCAT4Q643R3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 AC018755.3-202ENST00000596210 929 ntBASIC20.23■□□□□ 0.83
LPCAT4Q643R3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LPCAT4Q643R3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms