Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC24.81■■□□□ 1.56
COL13A1Q5TAT6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC24.81■■□□□ 1.56
COL13A1Q5TAT6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL13A1Q5TAT6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC24.81■■□□□ 1.56
COL13A1Q5TAT6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL13A1Q5TAT6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 NTF6B-201ENST00000591913 560 ntBASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.8■■□□□ 1.56
COL13A1Q5TAT6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.79■■□□□ 1.56
COL13A1Q5TAT6 AC010980.2-201ENST00000587099 1412 ntBASIC24.78■■□□□ 1.56
COL13A1Q5TAT6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
COL13A1Q5TAT6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC24.78■■□□□ 1.56
COL13A1Q5TAT6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
COL13A1Q5TAT6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC24.78■■□□□ 1.56
COL13A1Q5TAT6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC24.78■■□□□ 1.56
COL13A1Q5TAT6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
COL13A1Q5TAT6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.77■■□□□ 1.56
COL13A1Q5TAT6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL13A1Q5TAT6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC24.77■■□□□ 1.56
COL13A1Q5TAT6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL13A1Q5TAT6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL13A1Q5TAT6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.77■■□□□ 1.56
COL13A1Q5TAT6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL13A1Q5TAT6 NMU-205ENST00000511469 756 ntTSL 3 BASIC24.77■■□□□ 1.56
COL13A1Q5TAT6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL13A1Q5TAT6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
COL13A1Q5TAT6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
COL13A1Q5TAT6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 AC087388.1-201ENST00000571370 1112 ntBASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL13A1Q5TAT6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL13A1Q5TAT6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
COL13A1Q5TAT6 AC005521.1-201ENST00000393351 872 ntBASIC24.75■■□□□ 1.55
COL13A1Q5TAT6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
COL13A1Q5TAT6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
COL13A1Q5TAT6 PENK-204ENST00000518770 863 ntTSL 2 BASIC24.75■■□□□ 1.55
COL13A1Q5TAT6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.75■■□□□ 1.55
COL13A1Q5TAT6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.75■■□□□ 1.55
COL13A1Q5TAT6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
COL13A1Q5TAT6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL13A1Q5TAT6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL13A1Q5TAT6 AC010141.2-201ENST00000452426 721 ntBASIC24.74■■□□□ 1.55
COL13A1Q5TAT6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.74■■□□□ 1.55
COL13A1Q5TAT6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC24.74■■□□□ 1.55
COL13A1Q5TAT6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL13A1Q5TAT6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL13A1Q5TAT6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL13A1Q5TAT6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL13A1Q5TAT6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL13A1Q5TAT6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
COL13A1Q5TAT6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL13A1Q5TAT6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL13A1Q5TAT6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
COL13A1Q5TAT6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
COL13A1Q5TAT6 AC060766.5-201ENST00000590539 871 ntBASIC24.73■■□□□ 1.55
COL13A1Q5TAT6 AP001412.1-201ENST00000608405 714 ntBASIC24.73■■□□□ 1.55
COL13A1Q5TAT6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL13A1Q5TAT6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms