Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EFNB3Q15768 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
EFNB3Q15768 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
EFNB3Q15768 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
EFNB3Q15768 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
EFNB3Q15768 AC079834.2-201ENST00000609776 1949 ntBASIC18.39■□□□□ 0.53
EFNB3Q15768 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EFNB3Q15768 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.39■□□□□ 0.53
EFNB3Q15768 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
EFNB3Q15768 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EFNB3Q15768 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFNB3Q15768 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
EFNB3Q15768 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.39■□□□□ 0.53
EFNB3Q15768 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EFNB3Q15768 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
EFNB3Q15768 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
EFNB3Q15768 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.38■□□□□ 0.53
EFNB3Q15768 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
EFNB3Q15768 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EFNB3Q15768 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.38■□□□□ 0.53
EFNB3Q15768 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
EFNB3Q15768 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EFNB3Q15768 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EFNB3Q15768 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
EFNB3Q15768 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
EFNB3Q15768 AC087742.1-201ENST00000575880 1738 ntBASIC18.37■□□□□ 0.53
EFNB3Q15768 LINC00526-201ENST00000581067 1875 ntBASIC18.37■□□□□ 0.53
EFNB3Q15768 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNB3Q15768 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.37■□□□□ 0.53
EFNB3Q15768 AC006015.1-201ENST00000429970 570 ntBASIC18.37■□□□□ 0.53
EFNB3Q15768 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.37■□□□□ 0.53
EFNB3Q15768 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.37■□□□□ 0.53
EFNB3Q15768 KRT87P-202ENST00000534226 1464 ntBASIC18.37■□□□□ 0.53
EFNB3Q15768 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.37■□□□□ 0.53
EFNB3Q15768 AP004607.7-201ENST00000527152 1677 ntBASIC18.37■□□□□ 0.53
EFNB3Q15768 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNB3Q15768 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EFNB3Q15768 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EFNB3Q15768 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EFNB3Q15768 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EFNB3Q15768 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.36■□□□□ 0.53
EFNB3Q15768 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.36■□□□□ 0.53
EFNB3Q15768 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.36■□□□□ 0.53
EFNB3Q15768 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EFNB3Q15768 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EFNB3Q15768 AC137761.2-201ENST00000561729 223 ntBASIC18.36■□□□□ 0.53
EFNB3Q15768 AC145350.3-201ENST00000569033 163 ntBASIC18.36■□□□□ 0.53
EFNB3Q15768 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EFNB3Q15768 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.36■□□□□ 0.53
EFNB3Q15768 RARRES2P11-201ENST00000635158 484 ntBASIC18.36■□□□□ 0.53
EFNB3Q15768 AC055733.4-201ENST00000638462 1354 ntBASIC18.36■□□□□ 0.53
EFNB3Q15768 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EFNB3Q15768 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EFNB3Q15768 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EFNB3Q15768 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
EFNB3Q15768 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.35■□□□□ 0.53
EFNB3Q15768 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EFNB3Q15768 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.35■□□□□ 0.53
EFNB3Q15768 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.35■□□□□ 0.53
EFNB3Q15768 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EFNB3Q15768 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EFNB3Q15768 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EFNB3Q15768 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.35■□□□□ 0.53
EFNB3Q15768 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.35■□□□□ 0.53
EFNB3Q15768 AC004911.1-201ENST00000416316 871 ntBASIC18.35■□□□□ 0.53
EFNB3Q15768 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.35■□□□□ 0.53
EFNB3Q15768 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.35■□□□□ 0.53
EFNB3Q15768 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.35■□□□□ 0.53
EFNB3Q15768 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.35■□□□□ 0.53
EFNB3Q15768 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EFNB3Q15768 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
EFNB3Q15768 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EFNB3Q15768 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNB3Q15768 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.34■□□□□ 0.53
EFNB3Q15768 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNB3Q15768 AC137767.1-201ENST00000602918 1920 ntBASIC18.34■□□□□ 0.53
EFNB3Q15768 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EFNB3Q15768 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.34■□□□□ 0.53
EFNB3Q15768 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EFNB3Q15768 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNB3Q15768 AC016769.1-201ENST00000409132 1010 ntBASIC18.34■□□□□ 0.53
EFNB3Q15768 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.34■□□□□ 0.53
EFNB3Q15768 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.34■□□□□ 0.53
EFNB3Q15768 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.34■□□□□ 0.53
EFNB3Q15768 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.34■□□□□ 0.53
EFNB3Q15768 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.34■□□□□ 0.53
EFNB3Q15768 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
EFNB3Q15768 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
EFNB3Q15768 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNB3Q15768 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNB3Q15768 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNB3Q15768 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNB3Q15768 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNB3Q15768 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNB3Q15768 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
EFNB3Q15768 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.33■□□□□ 0.53
EFNB3Q15768 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
EFNB3Q15768 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
EFNB3Q15768 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EFNB3Q15768 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms