Protein–RNA interactions for Protein: Q12112

TY1B-NL1, Transposon Ty1-NL1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL1Q12112 RPC19YNL113W 429 nt3.67□□□□□ -1.82
TY1B-NL1Q12112 SUL1YBR294W 2580 nt3.67□□□□□ -1.82
TY1B-NL1Q12112 EDS1YBR033W 2760 nt3.67□□□□□ -1.82
TY1B-NL1Q12112 SPC97YHR172W 2472 nt3.66□□□□□ -1.82
TY1B-NL1Q12112 UBC12YLR306W 567 nt3.66□□□□□ -1.82
TY1B-NL1Q12112 SEC14YMR079W 915 nt3.66□□□□□ -1.82
TY1B-NL1Q12112 ALG2YGL065C 1512 nt3.66□□□□□ -1.82
TY1B-NL1Q12112 HOF1YMR032W 2010 nt3.65□□□□□ -1.83
TY1B-NL1Q12112 GPI19YDR437W 423 nt3.64□□□□□ -1.83
TY1B-NL1Q12112 TOM20YGR082W 552 nt3.64□□□□□ -1.83
TY1B-NL1Q12112 YIL014C-AYIL014C-A 315 nt3.64□□□□□ -1.83
TY1B-NL1Q12112 RPL20BYOR312C 519 nt3.64□□□□□ -1.83
TY1B-NL1Q12112 HCM1YCR065W 1695 nt3.64□□□□□ -1.83
TY1B-NL1Q12112 YGR067CYGR067C 2415 nt3.64□□□□□ -1.83
TY1B-NL1Q12112 SEC31YDL195W 3822 nt3.64□□□□□ -1.83
TY1B-NL1Q12112 YOR055WYOR055W 435 nt3.63□□□□□ -1.83
TY1B-NL1Q12112 NAT5YOR253W 531 nt3.63□□□□□ -1.83
TY1B-NL1Q12112 VPS33YLR396C 2076 nt3.63□□□□□ -1.83
TY1B-NL1Q12112 ORC6YHR118C 1308 nt3.63□□□□□ -1.83
TY1B-NL1Q12112 CCT7YJL111W 1653 nt3.63□□□□□ -1.83
TY1B-NL1Q12112 CCH1YGR217W 6120 nt3.62□□□□□ -1.83
TY1B-NL1Q12112 PWP2YCR057C 2772 nt3.62□□□□□ -1.83
TY1B-NL1Q12112 KIN28YDL108W 921 nt3.62□□□□□ -1.83
TY1B-NL1Q12112 RPS21BYJL136C 264 nt3.62□□□□□ -1.83
TY1B-NL1Q12112 YKL066WYKL066W 444 nt3.62□□□□□ -1.83
TY1B-NL1Q12112 RSC3YDR303C 2658 nt3.62□□□□□ -1.83
TY1B-NL1Q12112 MEF2YJL102W 2460 nt3.62□□□□□ -1.83
TY1B-NL1Q12112 YFR016CYFR016C 3702 nt3.61□□□□□ -1.83
TY1B-NL1Q12112 YDR464C-AYDR464C-A 189 nt3.61□□□□□ -1.83
TY1B-NL1Q12112 CAP2YIL034C 864 nt3.61□□□□□ -1.83
TY1B-NL1Q12112 RPN13YLR421C 471 nt3.61□□□□□ -1.83
TY1B-NL1Q12112 RRP36YOR287C 903 nt3.61□□□□□ -1.83
TY1B-NL1Q12112 REG2YBR050C 1017 nt3.61□□□□□ -1.83
TY1B-NL1Q12112 YBR085C-AYBR085C-A 258 nt3.61□□□□□ -1.83
TY1B-NL1Q12112 YPR015CYPR015C 744 nt3.61□□□□□ -1.83
TY1B-NL1Q12112 PHO88YBR106W 567 nt3.61□□□□□ -1.83
TY1B-NL1Q12112 RAV1YJR033C 4074 nt3.6□□□□□ -1.83
TY1B-NL1Q12112 KEL2YGR238C 2649 nt3.6□□□□□ -1.83
TY1B-NL1Q12112 RMA1YKL132C 1293 nt3.6□□□□□ -1.83
TY1B-NL1Q12112 GDI1YER136W 1356 nt3.6□□□□□ -1.83
TY1B-NL1Q12112 YFL065CYFL065C 309 nt3.59□□□□□ -1.83
TY1B-NL1Q12112 RRG7YOR305W 729 nt3.59□□□□□ -1.83
TY1B-NL1Q12112 YPL014WYPL014W 1146 nt3.59□□□□□ -1.83
TY1B-NL1Q12112 YGR027W-BYGR027W-B 5268 nt3.59□□□□□ -1.83
TY1B-NL1Q12112 YLR227W-BYLR227W-B 5268 nt3.59□□□□□ -1.83
TY1B-NL1Q12112 YPR158C-DYPR158C-D 5268 nt3.59□□□□□ -1.83
TY1B-NL1Q12112 ICR1ICR1 3199 nt3.59□□□□□ -1.83
TY1B-NL1Q12112 KTR6YPL053C 1341 nt3.59□□□□□ -1.84
TY1B-NL1Q12112 YDL023CYDL023C 321 nt3.58□□□□□ -1.84
TY1B-NL1Q12112 DOS2YDR068W 933 nt3.58□□□□□ -1.84
TY1B-NL1Q12112 PNC1YGL037C 651 nt3.58□□□□□ -1.84
TY1B-NL1Q12112 NCE102YPR149W 522 nt3.58□□□□□ -1.84
TY1B-NL1Q12112 ULS1YOR191W 4860 nt3.58□□□□□ -1.84
TY1B-NL1Q12112 LCL1YPL056C 306 nt3.58□□□□□ -1.84
TY1B-NL1Q12112 SPS22YCL048W 1392 nt3.57□□□□□ -1.84
TY1B-NL1Q12112 GPI8YDR331W 1236 nt3.57□□□□□ -1.84
TY1B-NL1Q12112 YGR291CYGR291C 222 nt3.57□□□□□ -1.84
TY1B-NL1Q12112 ANS1YHR126C 480 nt3.57□□□□□ -1.84
TY1B-NL1Q12112 POG1YIL122W 1056 nt3.57□□□□□ -1.84
TY1B-NL1Q12112 SCD5YOR329C 2619 nt3.57□□□□□ -1.84
TY1B-NL1Q12112 PSY2YNL201C 2577 nt3.57□□□□□ -1.84
TY1B-NL1Q12112 MCM4YPR019W 2802 nt3.57□□□□□ -1.84
TY1B-NL1Q12112 YIL028WYIL028W 399 nt3.56□□□□□ -1.84
TY1B-NL1Q12112 MEF1YLR069C 2286 nt3.56□□□□□ -1.84
TY1B-NL1Q12112 SAP1YER047C 2694 nt3.56□□□□□ -1.84
TY1B-NL1Q12112 MRD1YPR112C 2664 nt3.56□□□□□ -1.84
TY1B-NL1Q12112 VPS45YGL095C 1734 nt3.56□□□□□ -1.84
TY1B-NL1Q12112 QCR10YHR001W-A 234 nt3.56□□□□□ -1.84
TY1B-NL1Q12112 YOL159C-AYOL159C-A 273 nt3.56□□□□□ -1.84
TY1B-NL1Q12112 MAL32YBR299W 1755 nt3.56□□□□□ -1.84
TY1B-NL1Q12112 KIP3YGL216W 2418 nt3.55□□□□□ -1.84
TY1B-NL1Q12112 NAM9YNL137C 1461 nt3.55□□□□□ -1.84
TY1B-NL1Q12112 UFD4YKL010C 4452 nt3.55□□□□□ -1.84
TY1B-NL1Q12112 RPS22BYLR367W 393 nt3.55□□□□□ -1.84
TY1B-NL1Q12112 HFA1YMR207C 6372 nt3.55□□□□□ -1.84
TY1B-NL1Q12112 GCD10YNL062C 1437 nt3.55□□□□□ -1.84
TY1B-NL1Q12112 IES3YLR052W 753 nt3.54□□□□□ -1.84
TY1B-NL1Q12112 MCM16YPR046W 546 nt3.54□□□□□ -1.84
TY1B-NL1Q12112 PDR5YOR153W 4536 nt3.54□□□□□ -1.84
TY1B-NL1Q12112 YPR150WYPR150W 522 nt3.53□□□□□ -1.84
TY1B-NL1Q12112 YCL007CYCL007C 393 nt3.53□□□□□ -1.84
TY1B-NL1Q12112 YEF3YLR249W 3135 nt3.53□□□□□ -1.84
TY1B-NL1Q12112 DUN1YDL101C 1542 nt3.53□□□□□ -1.84
TY1B-NL1Q12112 CLN2YPL256C 1638 nt3.53□□□□□ -1.84
TY1B-NL1Q12112 SRO77YBL106C 3033 nt3.53□□□□□ -1.84
TY1B-NL1Q12112 RMT2YDR465C 1239 nt3.53□□□□□ -1.84
TY1B-NL1Q12112 VPS51YKR020W 495 nt3.53□□□□□ -1.84
TY1B-NL1Q12112 NNF1YJR112W 606 nt3.52□□□□□ -1.85
TY1B-NL1Q12112 ARG80YMR042W 534 nt3.52□□□□□ -1.85
TY1B-NL1Q12112 YNR062CYNR062C 984 nt3.52□□□□□ -1.85
TY1B-NL1Q12112 ANT1YPR128C 987 nt3.52□□□□□ -1.85
TY1B-NL1Q12112 POL1YNL102W 4407 nt3.52□□□□□ -1.85
TY1B-NL1Q12112 RIM1YCR028C-A 408 nt3.51□□□□□ -1.85
TY1B-NL1Q12112 STE2YFL026W 1296 nt3.51□□□□□ -1.85
TY1B-NL1Q12112 UTP22YGR090W 3714 nt3.51□□□□□ -1.85
TY1B-NL1Q12112 SBE2YDR351W 2595 nt3.51□□□□□ -1.85
TY1B-NL1Q12112 SER3YER081W 1410 nt3.51□□□□□ -1.85
TY1B-NL1Q12112 SCY1YGL083W 2415 nt3.51□□□□□ -1.85
TY1B-NL1Q12112 GZF3YJL110C 1656 nt3.5□□□□□ -1.85
TY1B-NL1Q12112 ATG23YLR431C 1362 nt3.5□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms