Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 GTF1YGR102C 552 nt2.69□□□□□ -1.98
HRD1Q08109 CLC1YGR167W 702 nt2.69□□□□□ -1.98
HRD1Q08109 PET54YGR222W 882 nt2.69□□□□□ -1.98
HRD1Q08109 EMG1YLR186W 759 nt2.69□□□□□ -1.98
HRD1Q08109 RRG9YNL213C 645 nt2.69□□□□□ -1.98
HRD1Q08109 MGA1YGR249W 1371 nt2.69□□□□□ -1.98
HRD1Q08109 EXO5YBR163W 1758 nt2.69□□□□□ -1.98
HRD1Q08109 ARG2YJL071W 1725 nt2.68□□□□□ -1.98
HRD1Q08109 LRG1YDL240W 3054 nt2.68□□□□□ -1.98
HRD1Q08109 YCR085WYCR085W 354 nt2.68□□□□□ -1.98
HRD1Q08109 YDR249CYDR249C 1122 nt2.68□□□□□ -1.98
HRD1Q08109 YPR1YDR368W 939 nt2.68□□□□□ -1.98
HRD1Q08109 WBP1YEL002C 1293 nt2.68□□□□□ -1.98
HRD1Q08109 RPL30YGL030W 318 nt2.68□□□□□ -1.98
HRD1Q08109 MRS3YJL133W 945 nt2.68□□□□□ -1.98
HRD1Q08109 SNO1YMR095C 675 nt2.68□□□□□ -1.98
HRD1Q08109 IMP4YNL075W 873 nt2.68□□□□□ -1.98
HRD1Q08109 CHS2YBR038W 2892 nt2.68□□□□□ -1.98
HRD1Q08109 TGL3YMR313C 1929 nt2.68□□□□□ -1.98
HRD1Q08109 MDM38YOL027C 1722 nt2.68□□□□□ -1.98
HRD1Q08109 CIN8YEL061C 3003 nt2.67□□□□□ -1.98
HRD1Q08109 YCR101CYCR101C 549 nt2.67□□□□□ -1.98
HRD1Q08109 COS7YDL248W 1152 nt2.67□□□□□ -1.98
HRD1Q08109 YFL051CYFL051C 483 nt2.67□□□□□ -1.98
HRD1Q08109 MDV1YJL112W 2145 nt2.67□□□□□ -1.98
HRD1Q08109 COS5YJR161C 1152 nt2.67□□□□□ -1.98
HRD1Q08109 YKR047WYKR047W 306 nt2.67□□□□□ -1.98
HRD1Q08109 SEC65YML105C 822 nt2.67□□□□□ -1.98
HRD1Q08109 VPS21YOR089C 633 nt2.67□□□□□ -1.98
HRD1Q08109 VTC4YJL012C 2166 nt2.67□□□□□ -1.98
HRD1Q08109 SHQ1YIL104C 1524 nt2.67□□□□□ -1.98
HRD1Q08109 CUE3YGL110C 1875 nt2.67□□□□□ -1.98
HRD1Q08109 CNA1YLR433C 1662 nt2.66□□□□□ -1.98
HRD1Q08109 YGR237CYGR237C 2358 nt2.66□□□□□ -1.98
HRD1Q08109 ATP25YMR098C 1839 nt2.66□□□□□ -1.98
HRD1Q08109 YPT35YHR105W 645 nt2.66□□□□□ -1.98
HRD1Q08109 SPC34YKR037C 888 nt2.66□□□□□ -1.98
HRD1Q08109 RPN13YLR421C 471 nt2.66□□□□□ -1.98
HRD1Q08109 YLR462WYLR462W 609 nt2.66□□□□□ -1.98
HRD1Q08109 NDJ1YOL104C 1059 nt2.66□□□□□ -1.98
HRD1Q08109 YPR015CYPR015C 744 nt2.66□□□□□ -1.98
HRD1Q08109 YPR150WYPR150W 522 nt2.66□□□□□ -1.98
HRD1Q08109 PCI8YIL071C 1335 nt2.66□□□□□ -1.98
HRD1Q08109 KIN3YAR018C 1308 nt2.66□□□□□ -1.98
HRD1Q08109 BNA4YBL098W 1383 nt2.65□□□□□ -1.98
HRD1Q08109 YGL152CYGL152C 678 nt2.65□□□□□ -1.99
HRD1Q08109 YJR111CYJR111C 852 nt2.65□□□□□ -1.99
HRD1Q08109 BUR2YLR226W 1188 nt2.65□□□□□ -1.99
HRD1Q08109 YPR203WYPR203W 309 nt2.65□□□□□ -1.99
HRD1Q08109 NDC80YIL144W 2076 nt2.65□□□□□ -1.99
HRD1Q08109 CUS1YMR240C 1311 nt2.65□□□□□ -1.99
HRD1Q08109 YNR063WYNR063W 1824 nt2.64□□□□□ -1.99
HRD1Q08109 FUN30YAL019W 3396 nt2.64□□□□□ -1.99
HRD1Q08109 PUF6YDR496C 1971 nt2.64□□□□□ -1.99
HRD1Q08109 IMG2YCR071C 441 nt2.64□□□□□ -1.99
HRD1Q08109 YDR282CYDR282C 1245 nt2.64□□□□□ -1.99
HRD1Q08109 SDP1YIL113W 630 nt2.64□□□□□ -1.99
HRD1Q08109 MBR1YKL093W 1020 nt2.64□□□□□ -1.99
HRD1Q08109 YMR084WYMR084W 789 nt2.64□□□□□ -1.99
HRD1Q08109 YMR294W-AYMR294W-A 360 nt2.64□□□□□ -1.99
HRD1Q08109 RUF5-1RUF5-1 710 nt2.64□□□□□ -1.99
HRD1Q08109 RUF5-2RUF5-2 710 nt2.64□□□□□ -1.99
HRD1Q08109 NIP7YPL211W 546 nt2.64□□□□□ -1.99
HRD1Q08109 YTA7YGR270W 4140 nt2.64□□□□□ -1.99
HRD1Q08109 DUF1YOL087C 3351 nt2.64□□□□□ -1.99
HRD1Q08109 JSN1YJR091C 3276 nt2.64□□□□□ -1.99
HRD1Q08109 SNT1YCR033W 3681 nt2.63□□□□□ -1.99
HRD1Q08109 INP52YNL106C 3552 nt2.63□□□□□ -1.99
HRD1Q08109 VAS1YGR094W 3315 nt2.63□□□□□ -1.99
HRD1Q08109 DBP7YKR024C 2229 nt2.63□□□□□ -1.99
HRD1Q08109 HAT2YEL056W 1206 nt2.63□□□□□ -1.99
HRD1Q08109 COS8YHL048W 1146 nt2.63□□□□□ -1.99
HRD1Q08109 DOG2YHR043C 741 nt2.63□□□□□ -1.99
HRD1Q08109 YHR086W-AYHR086W-A 162 nt2.63□□□□□ -1.99
HRD1Q08109 AIM25YJR100C 984 nt2.63□□□□□ -1.99
HRD1Q08109 MRPL51YPR100W 423 nt2.63□□□□□ -1.99
HRD1Q08109 TFB2YPL122C 1542 nt2.63□□□□□ -1.99
HRD1Q08109 FLO11YIR019C 4104 nt2.62□□□□□ -1.99
HRD1Q08109 PDS1YDR113C 1122 nt2.62□□□□□ -1.99
HRD1Q08109 RRP17YDR412W 708 nt2.62□□□□□ -1.99
HRD1Q08109 APA2YDR530C 978 nt2.62□□□□□ -1.99
HRD1Q08109 ERV29YGR284C 933 nt2.62□□□□□ -1.99
HRD1Q08109 CPR7YJR032W 1182 nt2.62□□□□□ -1.99
HRD1Q08109 YBR089WYBR089W 600 nt2.62□□□□□ -1.99
HRD1Q08109 YVC1YOR087W 2028 nt2.62□□□□□ -1.99
HRD1Q08109 CMK1YFR014C 1341 nt2.62□□□□□ -1.99
HRD1Q08109 TPD3YAL016W 1908 nt2.62□□□□□ -1.99
HRD1Q08109 RPS14AYCR031C 414 nt2.61□□□□□ -1.99
HRD1Q08109 YEL009C-AYEL009C-A 408 nt2.61□□□□□ -1.99
HRD1Q08109 CDC26YFR036W 375 nt2.61□□□□□ -1.99
HRD1Q08109 TAF3YPL011C 1062 nt2.61□□□□□ -1.99
HRD1Q08109 FES1YBR101C 873 nt2.61□□□□□ -1.99
HRD1Q08109 SRB8YCR081W 4284 nt2.61□□□□□ -1.99
HRD1Q08109 HFD1YMR110C 1599 nt2.61□□□□□ -1.99
HRD1Q08109 MOT1YPL082C 5604 nt2.61□□□□□ -1.99
HRD1Q08109 VBA4YDR119W 2307 nt2.6□□□□□ -1.99
HRD1Q08109 CBP2YHL038C 1893 nt2.6□□□□□ -1.99
HRD1Q08109 MDM1YML104C 3384 nt2.6□□□□□ -1.99
HRD1Q08109 NTO1YPR031W 2247 nt2.6□□□□□ -1.99
HRD1Q08109 AI5_BETAQ0075 1065 nt2.6□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms