Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.49■□□□□ 0.71
RPS4XP62701 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPS4XP62701 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RPS4XP62701 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4XP62701 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4XP62701 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4XP62701 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4XP62701 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4XP62701 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.48■□□□□ 0.71
RPS4XP62701 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.48■□□□□ 0.71
RPS4XP62701 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RPS4XP62701 MIR4767-201ENST00000582827 78 ntBASIC19.48■□□□□ 0.71
RPS4XP62701 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.48■□□□□ 0.71
RPS4XP62701 MIR5787-201ENST00000611784 55 ntBASIC19.48■□□□□ 0.71
RPS4XP62701 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.48■□□□□ 0.71
RPS4XP62701 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPS4XP62701 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.48■□□□□ 0.71
RPS4XP62701 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RPS4XP62701 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RPS4XP62701 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4XP62701 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
RPS4XP62701 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4XP62701 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RPS4XP62701 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4XP62701 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4XP62701 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.47■□□□□ 0.71
RPS4XP62701 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.47■□□□□ 0.71
RPS4XP62701 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4XP62701 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4XP62701 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RPS4XP62701 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4XP62701 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4XP62701 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.47■□□□□ 0.71
RPS4XP62701 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
RPS4XP62701 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
RPS4XP62701 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4XP62701 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPS4XP62701 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.47■□□□□ 0.71
RPS4XP62701 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4XP62701 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.46■□□□□ 0.71
RPS4XP62701 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4XP62701 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4XP62701 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.46■□□□□ 0.71
RPS4XP62701 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4XP62701 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4XP62701 SERBP1P1-201ENST00000396021 1160 ntBASIC19.46■□□□□ 0.71
RPS4XP62701 AC026271.2-201ENST00000428091 497 ntBASIC19.46■□□□□ 0.71
RPS4XP62701 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4XP62701 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4XP62701 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4XP62701 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4XP62701 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RPS4XP62701 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPS4XP62701 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.45■□□□□ 0.7
RPS4XP62701 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RPS4XP62701 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4XP62701 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4XP62701 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4XP62701 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RPS4XP62701 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4XP62701 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.45■□□□□ 0.7
RPS4XP62701 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4XP62701 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4XP62701 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.45■□□□□ 0.7
RPS4XP62701 AC092666.2-201ENST00000613287 246 ntBASIC19.45■□□□□ 0.7
RPS4XP62701 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPS4XP62701 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RPS4XP62701 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.44■□□□□ 0.7
RPS4XP62701 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4XP62701 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPS4XP62701 AC027682.1-201ENST00000562846 899 ntBASIC19.44■□□□□ 0.7
RPS4XP62701 AC010525.1-201ENST00000585559 441 ntBASIC19.44■□□□□ 0.7
RPS4XP62701 AC011298.3-201ENST00000615796 283 ntBASIC19.44■□□□□ 0.7
RPS4XP62701 AC136469.2-201ENST00000623944 1028 ntBASIC19.44■□□□□ 0.7
RPS4XP62701 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.44■□□□□ 0.7
RPS4XP62701 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.44■□□□□ 0.7
RPS4XP62701 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RPS4XP62701 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4XP62701 AC244015.2-201ENST00000616358 1861 ntBASIC19.43■□□□□ 0.7
RPS4XP62701 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4XP62701 OR7E47P-201ENST00000546390 1422 ntBASIC19.43■□□□□ 0.7
RPS4XP62701 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4XP62701 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RPS4XP62701 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4XP62701 AC087239.1-201ENST00000622671 572 ntBASIC19.43■□□□□ 0.7
RPS4XP62701 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4XP62701 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4XP62701 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4XP62701 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4XP62701 RASA4CP-201ENST00000424092 1398 ntBASIC19.43■□□□□ 0.7
RPS4XP62701 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
RPS4XP62701 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RPS4XP62701 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPS4XP62701 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
RPS4XP62701 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RPS4XP62701 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPS4XP62701 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RPS4XP62701 AC010141.3-201ENST00000456659 717 ntBASIC19.42■□□□□ 0.7
RPS4XP62701 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RPS4XP62701 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms