Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S2P56377 MIR939-201ENST00000401314 82 ntBASIC20.99■□□□□ 0.95
AP1S2P56377 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.99■□□□□ 0.95
AP1S2P56377 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
AP1S2P56377 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.99■□□□□ 0.95
AP1S2P56377 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S2P56377 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S2P56377 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S2P56377 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.99■□□□□ 0.95
AP1S2P56377 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S2P56377 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP1S2P56377 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.99■□□□□ 0.95
AP1S2P56377 RASA4CP-201ENST00000424092 1398 ntBASIC20.98■□□□□ 0.95
AP1S2P56377 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
AP1S2P56377 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
AP1S2P56377 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
AP1S2P56377 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP1S2P56377 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP1S2P56377 AC091305.1-201ENST00000479476 895 ntBASIC20.98■□□□□ 0.95
AP1S2P56377 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.98■□□□□ 0.95
AP1S2P56377 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
AP1S2P56377 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.98■□□□□ 0.95
AP1S2P56377 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
AP1S2P56377 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
AP1S2P56377 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AP1S2P56377 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S2P56377 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S2P56377 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S2P56377 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S2P56377 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S2P56377 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S2P56377 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.97■□□□□ 0.95
AP1S2P56377 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.97■□□□□ 0.95
AP1S2P56377 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.97■□□□□ 0.95
AP1S2P56377 AF213884.3-201ENST00000563833 479 ntBASIC20.97■□□□□ 0.95
AP1S2P56377 AL031432.3-201ENST00000607698 485 ntBASIC20.97■□□□□ 0.95
AP1S2P56377 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.97■□□□□ 0.95
AP1S2P56377 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S2P56377 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S2P56377 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S2P56377 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S2P56377 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
AP1S2P56377 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.97■□□□□ 0.95
AP1S2P56377 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP1S2P56377 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
AP1S2P56377 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S2P56377 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S2P56377 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S2P56377 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S2P56377 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S2P56377 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S2P56377 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.96■□□□□ 0.95
AP1S2P56377 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.96■□□□□ 0.95
AP1S2P56377 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
AP1S2P56377 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S2P56377 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S2P56377 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AP1S2P56377 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
AP1S2P56377 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
AP1S2P56377 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.95■□□□□ 0.94
AP1S2P56377 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
AP1S2P56377 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S2P56377 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S2P56377 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S2P56377 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S2P56377 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S2P56377 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.95■□□□□ 0.94
AP1S2P56377 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S2P56377 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
AP1S2P56377 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S2P56377 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.95■□□□□ 0.94
AP1S2P56377 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.95■□□□□ 0.94
AP1S2P56377 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP1S2P56377 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S2P56377 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S2P56377 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
AP1S2P56377 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.94■□□□□ 0.94
AP1S2P56377 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S2P56377 AL136967.2-201ENST00000623968 743 ntBASIC20.94■□□□□ 0.94
AP1S2P56377 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S2P56377 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.94■□□□□ 0.94
AP1S2P56377 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S2P56377 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
AP1S2P56377 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP1S2P56377 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S2P56377 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S2P56377 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S2P56377 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
AP1S2P56377 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S2P56377 SUDS3P1-201ENST00000505831 966 ntBASIC20.93■□□□□ 0.94
AP1S2P56377 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.93■□□□□ 0.94
AP1S2P56377 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.93■□□□□ 0.94
AP1S2P56377 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.93■□□□□ 0.94
AP1S2P56377 SMUG1P1-201ENST00000590640 811 ntBASIC20.93■□□□□ 0.94
AP1S2P56377 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S2P56377 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S2P56377 TSPY26P-201ENST00000476365 1326 ntBASIC20.93■□□□□ 0.94
AP1S2P56377 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S2P56377 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP1S2P56377 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms